build: Can't actually get run of the tar.gz unzip step

Because of the Spaceranger URL.
nf-core · Nov 25, 2024 · e5cc981 · e5cc981
1 parent 9b5522c
commit e5cc981
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/modules/nf-core/spaceranger/Dockerfile b/modules/nf-core/spaceranger/Dockerfile
@@ -24,8 +24,10 @@ ENV PATH="$MAMBA_ROOT_PREFIX/bin:$PATH"
 # https://docs.docker.com/reference/dockerfile/#add---checksum
 ADD --checksum=sha256:$SPACERANGER_SHA256 \
     $SPACERANGER_URL \
-    /opt/spaceranger-$SPACERANGER_VER
+    /opt/spaceranger-$SPACERANGER_VER.tar.gz
 
 # Install spaceranger
+RUN tar -xzf /opt/spaceranger-$SPACERANGER_VER.tar.gz -C /opt/ \
+    && rm /opt/spaceranger-$SPACERANGER_VER.tar.gz \
+    && ln -s /opt/spaceranger-$SPACERANGER_VER/spaceranger /usr/bin/spaceranger
 ENV PATH="/opt/spaceranger-$SPACERANGER_VER:$PATH"
-RUN ln -s /opt/spaceranger-$SPACERANGER_VER/spaceranger /usr/bin/spaceranger