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update Simpleaf modules, subworkflow#424

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DongzeHE wants to merge 17 commits intonf-core:devnf-core/scrnaseq:devfrom DongzeHE:devDongzeHE/scrnaseq:devCopy head branch name to clipboard

+1,519-224

Commits

Commits on Jan 20, 2025

• update simpleaf subworkflow

  an-altosian

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  fec1962

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Commits on Jan 21, 2025

• adopt new simpleaf modules

  an-altosian

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  c6b87c4

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Commits on Jan 22, 2025

• tested changes

  an-altosian

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  f3e2977

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• Merge pull request #1 from an-altosian/dev

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  DongzeHE

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• Merge branch 'dev' into dev

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Commits on Jan 23, 2025

• adopt new t2g format in simpleaf index out

  an-altosian

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  bec0bfa

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• Merge branch 'DongzeHE:dev' into dev

  an-altosian

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  bc5df5e

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• fix typos

  an-altosian

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  0e4c242

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• Merge branch 'dev' of https://github.com/an-altosian/scrnaseq into dev

  an-altosian

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  f82884b

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• fix typos

  an-altosian

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  2513ef0

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Commits on Jan 27, 2025

• update doc

  an-altosian

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  6f3834b

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Commits on Jan 31, 2025

• avoid using channel.of

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  afcc3a9

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• Merge pull request #2 from an-altosian/dev

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  DongzeHE

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• back compatibility

  an-altosian

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  2bd54ea

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• Merge branch 'dev' of https://github.com/DongzeHE/scrnaseq into dev

  an-altosian

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  7301865

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• rewrite mtx_to_h5ad_simpleaf to be aware of USA mode

  an-altosian

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• rewrite mtx_to_h5ad_simpleaf to be aware of USA mode

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  1b6dc9b

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