Merge pull request #447 from nf-osi/allaway-patch-4

Add  NanoString Human nCounter PanCancer IO360 Panel

NF.jsonld

@@ -2580,6 +2580,8 @@
       "@id" : "bts:Cy3"
     }, {
       "@id" : "bts:Cy5"
+    }, {
+      "@id" : "bts:NotApplicable"
     } ],
     "rdfs:label" : "channel",
     "rdfs:comment" : "Color channel used to generate data file.",
@@ -6053,6 +6055,8 @@
       "@id" : "bts:OlympusDP80"
     }, {
       "@id" : "bts:NanostringCounter"
+    }, {
+      "@id" : "bts:NanoStringHumannCounterPanCancerIO360Panel"
     }, {
       "@id" : "bts:NanoFCM"
     }, {
@@ -18254,6 +18258,17 @@
     },
     "sms:displayName" : "Tulane University",
     "sms:required" : "sms:false"
+  }, {
+    "@id" : "bts:NanoStringHumannCounterPanCancerIO360Panel",
+    "@type" : "rdfs:Class",
+    "rdfs:comment" : "TBD",
+    "rdfs:label" : "NanoStringHumannCounterPanCancerIO360Panel",
+    "rdfs:subClassOf" : [ ],
+    "schema:isPartOf" : {
+      "@id" : "http://schema.biothings.io/"
+    },
+    "sms:displayName" : "NanoString Human nCounter PanCancer IO360 Panel",
+    "sms:required" : "sms:false"
   }, {
     "@id" : "bts:iPSC-derivedneuronalprogenitorcell",
     "@type" : "rdfs:Class",

modules/Assay/Parameter.yaml

@@ -7,6 +7,9 @@ enums:
       Cy5:
         description: Fluorescent dye used for the red channel on an array
         meaning: http://purl.obolibrary.org/obo/FBbi_00000450
+      Not Applicable:
+        description:
+        meaning: 
   GenePerturbationEnum:
     permissible_values:
       knockdown:

modules/Assay/Platform.yaml

@@ -166,6 +166,8 @@ enums:
         source: https://www.olympus-lifescience.com/en/camera/color/dp80/
       Nanostring Counter:
         description: ''
+      NanoString Human nCounter PanCancer IO360 Panel:
+        source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL32069
       NanoFCM:
         description: Instrument for assessing sizing,concentration & phenotyping of bio-nanoparticles.
         source: https://www.nanofcm.com/