Rebuild NF.jsonld, json

nf-osi · Mar 14, 2024 · c08aea0 · c08aea0
1 parent 9914728
commit c08aea0
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Showing 3 changed files with 33 additions and 3 deletions.
diff --git a/NF.jsonld b/NF.jsonld
@@ -220,7 +220,7 @@
   }, {
     "@id" : "bts:Data",
     "@type" : "rdfs:Class",
-    "rdfs:comment" : "TBD",
+    "rdfs:comment" : "What the data (file) contains.",
     "rdfs:label" : "Data",
     "rdfs:subClassOf" : [ ],
     "schema:isPartOf" : {
@@ -7117,6 +7117,10 @@
       "@id" : "bts:genomicVariants"
     }, {
       "@id" : "bts:rawcounts"
+    }, {
+      "@id" : "bts:RawIntensities"
+    }, {
+      "@id" : "bts:NormalizedIntensities"
     }, {
       "@id" : "bts:PharmacokineticStudy"
     }, {
@@ -21285,6 +21289,17 @@
     },
     "sms:displayName" : "University of Washington, Seattle",
     "sms:required" : "sms:false"
+  }, {
+    "@id" : "bts:NormalizedIntensities",
+    "@type" : "rdfs:Class",
+    "rdfs:comment" : "TBD",
+    "rdfs:label" : "NormalizedIntensities",
+    "rdfs:subClassOf" : [ ],
+    "schema:isPartOf" : {
+      "@id" : "http://schema.biothings.io/"
+    },
+    "sms:displayName" : "NormalizedIntensities",
+    "sms:required" : "sms:false"
   }, {
     "@id" : "bts:LTQOrbitrapXL",
     "@type" : "rdfs:Class",
@@ -21857,6 +21872,17 @@
     },
     "sms:displayName" : "bed gappedPeak",
     "sms:required" : "sms:false"
+  }, {
+    "@id" : "bts:RawIntensities",
+    "@type" : "rdfs:Class",
+    "rdfs:comment" : "TBD",
+    "rdfs:label" : "RawIntensities",
+    "rdfs:subClassOf" : [ ],
+    "schema:isPartOf" : {
+      "@id" : "http://schema.biothings.io/"
+    },
+    "sms:displayName" : "RawIntensities",
+    "sms:required" : "sms:false"
   }, {
     "@id" : "bts:AnnotatedSomaticVariants",
     "@type" : "rdfs:Class",

diff --git a/registered-json-schemas/PortalDataset.json b/registered-json-schemas/PortalDataset.json
@@ -196,7 +196,7 @@
       },
       "dataType": {
         "items": {
-          "description": "",
+          "description": "What the data (file) contains.",
           "enum": [
             "immunoassay",
             "behavior process",
@@ -217,6 +217,8 @@
             "genomicFeatures",
             "genomicVariants",
             "raw counts",
+            "RawIntensities",
+            "NormalizedIntensities",
             "Pharmacokinetic Study",
             "mask image",
             "chromatinActivity",

diff --git a/registered-json-schemas/PortalStudy.json b/registered-json-schemas/PortalStudy.json
@@ -24,7 +24,7 @@
       },
       "dataType": {
         "items": {
-          "description": "",
+          "description": "What the data (file) contains.",
           "enum": [
             "immunoassay",
             "behavior process",
@@ -45,6 +45,8 @@
             "genomicFeatures",
             "genomicVariants",
             "raw counts",
+            "RawIntensities",
+            "NormalizedIntensities",
             "Pharmacokinetic Study",
             "mask image",
             "chromatinActivity",