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Update Platform.yaml #515

Merged
merged 2 commits into from
Aug 28, 2024
Merged

Update Platform.yaml #515

merged 2 commits into from
Aug 28, 2024

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cconrad8
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@cconrad8 cconrad8 requested a review from anngvu August 28, 2024 15:27
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PR Preview Action v1.4.7
🚀 Deployed preview to https://nf-osi.github.io/nf-metadata-dictionary/pr-preview/pr-515/
on branch gh-pages at 2024-08-28 15:28 UTC

@cconrad8
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Context: platform is needed to be added to data dictionary for this project https://www.synapse.org/Synapse:syn26957109

@anngvu anngvu merged commit 66e6997 into main Aug 28, 2024
@anngvu anngvu deleted the new-platform branch August 28, 2024 16:32
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Test Suite Report 24.7.2

Template Generation

template result link
ClinicalAssayTemplate 😄 template link
EpigeneticsAssayTemplate 😄 template link
FlowCytometryTemplate 😄 template link
GenomicsAssayTemplate 😄 template link
GenomicsAssayTemplateExtended 😄 template link
HumanCohortTemplate 😄 template link
ImagingAssayTemplate 😄 template link
LightScatteringAssayTemplate 😄 template link
MethylationArrayTemplate 😄 template link
MRIAssayTemplate 😄 template link
PharmacokineticsAssayTemplate 😄 template link
PlateBasedReporterAssayTemplate 😄 template link
ProcessedAlignedReadsTemplate 😄 template link
ProcessedExpressionTemplate 😄 template link
ProcessedVariantCallsTemplate 😄 template link
ProteomicsAssayTemplate 😄 template link
ProtocolTemplate 😄 template link
RNASeqTemplate 😄 template link
ScRNASeqTemplate 😄 template link
UpdateMilestoneReport 😄 template link
WESTemplate 😄 template link
WGSTemplate 😄 template link

Manifest Validation

manifest result expectation
GenomicsAssayTemplate_0.csv 😄 Lists can be blank if attr not required using ‘list like’ rule
GenomicsAssayTemplate_1.csv 😄 Mixing blanks and regular list values works
GenomicsAssayTemplate_2.csv 😄 Conditional validation for attributes is currently not supported
GenomicsAssayTemplate_control.csv 😄 There should be no issue with this template.
ScRNASeqTemplate_0.csv 😄 Single list val works by using ‘list like’ rule
ScRNASeqTemplate_1.csv 😄 Fail because of missing data in required field libraryStrand

Manifest Submission

manifest pass
GenomicsAssayTemplate_0.csv 😄
GenomicsAssayTemplate_1.csv 😄
GenomicsAssayTemplate_2.csv 😄
GenomicsAssayTemplate_control.csv 😄
ScRNASeqTemplate_0.csv

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3 participants