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Update nf_research_tools.rdb.model.csv #68

Update nf_research_tools.rdb.model.csv

Update nf_research_tools.rdb.model.csv #68

name: schematic-schema-convert
on:
push:
branches:
- '**' # matches every branch
- '!main' # excludes main
paths:
- 'nf_research_tools.rdb.model.csv'
workflow_dispatch:
env:
schema_filename: nf_research_tools.rdb.model.csv
jobs:
build:
runs-on: ubuntu-22.04
steps:
- name: Install System Dependencies
run: |
sudo apt-get update
sudo apt-get install -y pip python3.10-venv libcurl4-openssl-dev
- uses: actions/checkout@v3
with:
ref: ${{ github.event.pull_request.head.ref }}
persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal access token.
fetch-depth: 0 # otherwise, there would be errors pushing refs to the destination repository
- name: Install schematic and convert schema #temporarily revert to this to use edge version of schematic
shell: bash
run: |
pip install git+https://github.com/Sage-Bionetworks/schematic.git@74d3b98f97eb14f70e9f6ad3a02005812b237329
schematic schema convert $schema_filename -o nf-research-tools.jsonld
- name: Commit files
run: |
git config --local user.email "[email protected]"
git config --local user.name "nf-osi[bot]"
git commit -m "Add changes" -a
- name: Push changes
uses: ad-m/github-push-action@master
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
branch: ${{ github.ref }}