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update biobank valid values
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allaway authored Oct 26, 2023
1 parent 4b7cc9a commit cffe504
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions nf_research_tools.rdb.model.csv
Original file line number Diff line number Diff line change
Expand Up @@ -57,10 +57,10 @@ biobankId,A unique identifier for the biobank.,,,TRUE,,biobankDetails,,,
biobankURL,A URL for the biobank landing page.,,,TRUE,,biobankDetails,,,
specimenType,The types of specimens that are banked.,"human tissue, xenograft tumors, cell lines",,TRUE,,biobankDetails,,,list like
specimenTissueType,The types of tissues that are banked.,"blood, tumor, cerebrospinal fluid, nerve, skin, bone, brain",,TRUE,,biobankDetails,,,list like
tumorType,"The types of tumors that are banked, if applicable.","cutaneous neurofibroma, plexiform neurofibroma, schwannoma, meningioma, malignant peripheral nerve sheath tumor, low grade glioma, high grade glioma, pheochromocytoma, optic nerve glioma, atypical neurofibroma, neurofibroma NOS, diffuse infiltrating neurofibroma, brain NOS",,TRUE,,biobankDetails,,,list like
tumorType,"The types of tumors that are banked, if applicable.","cutaneous neurofibroma, plexiform neurofibroma, atypical neurofibroma, schwannoma, meningioma, malignant peripheral nerve sheath tumor, low grade glioma, high grade glioma, pheochromocytoma, optic nerve glioma, atypical neurofibroma, neurofibroma NOS, diffuse infiltrating neurofibroma, brain NOS, other",,TRUE,,biobankDetails,,,list like
diseaseType,"The diseases of the banked specimens, if applicable.","Neurofibromatosis type 1, Neurofibromatosis type 2, Schwannomatosis",,TRUE,,biobankDetails,,,list like
specimenPreparationMethod,The preservation methods used by the biobank.,"Fresh collected, Flash frozen, FFPE, Cryopreserved, OCT, RNA later, Formalin-fixed, Ethanol",,TRUE,,biobankDetails,,,list like
specimenFormat,How the specimens have been processed in preparation for distribution.,"whole tumor, slide, whole cell lysate, DNA, RNA",,TRUE,,biobankDetails,,,list like
specimenFormat,How the specimens have been processed in preparation for distribution.,"whole tumor, slide, cells, whole cell lysate, DNA, RNA",,TRUE,,biobankDetails,,,list like
observation,"A remark, statement, or comment based on the resource.",,"Component, observationId, resourceId, publicationId, observationSubmitterName, synapseId, observationText, observationType, observationPhase, observationTime, observationTimeUnits, reliabilityRating, easeOfUseRating, observationLink",FALSE,,observation,"observationId, resourceId, publicationId, observationSubmitterName, synapseId, observationText, observationType, observationPhase, observationTime, observationTimeUnits, reliabilityRating, easeOfUseRating, observationLink","resource, investigator, publication",
observationId,A unique identifier for the observation.,,,TRUE,,observation,,,
observationSubmitterName,The name of the person submitting the observation. ,,,TRUE,,observation,,,
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