ViralMSA v1.1.24

• Added mm2-fast

ViralMSA v1.1.23

• Updated reference genome list function

ViralMSA v1.1.22

• Added reference genome for Monkeypox (NC_063383)

ViralMSA v1.1.21

• Added Winnowmap

ViralMSA v1.1.20

• Added NGMLR

ViralMSA v1.1.19

• Added DRAGMAP

ViralMSA v1.1.18

• Added wfmash

ViralMSA v1.1.17

• Added citations to log output

ViralMSA v1.1.16

• Support both .mmi and .mms file extension for LRA index file
  • The file extension was changed from .mmi to .mms to avoid overwriting Minimap2 index (see this commit)

ViralMSA v1.1.15

• Added LRA