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@niu-lab

Beifang Niu's Lab

Niu's Lab at Computer Network Information Center (CNIC) of the Chinese Academy of Sciences (CAS)

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  1. msisensor2 msisensor2 Public

    Microsatellite instability (MSI) detection for tumor only data.

    R 95 21

  2. msisensor-ct msisensor-ct Public

    Microsatellite instability (MSI) detection for cfDNA samples.

    Makefile 18 3

  3. gclust gclust Public

    genome sized sequences clustering

    C++ 13 3

  4. docker-flt3-itd docker-flt3-itd Public

    Python 6

  5. msisensor msisensor Public

    Forked from ding-lab/msisensor

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++ 5 1

  6. DIVIS DIVIS Public

    integrated and customisable pipeline of cancer genome sequencing analysis

    Perl 3 2

Repositories

Showing 10 of 24 repositories
  • msisensor2 Public

    Microsatellite instability (MSI) detection for tumor only data.

    niu-lab/msisensor2’s past year of commit activity
    R 95 GPL-3.0 21 39 0 Updated Apr 23, 2024
  • msisensor2-py Public

    Microsatellite instability (MSI) detection tool of python version for tumor only data .

    niu-lab/msisensor2-py’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Mar 27, 2024
  • DIVIS Public

    integrated and customisable pipeline of cancer genome sequencing analysis

    niu-lab/DIVIS’s past year of commit activity
    Perl 3 2 1 0 Updated Feb 23, 2021
  • msisensor-ct Public

    Microsatellite instability (MSI) detection for cfDNA samples.

    niu-lab/msisensor-ct’s past year of commit activity
    Makefile 18 GPL-3.0 3 9 0 Updated Feb 20, 2021
  • docker-flt3-itd Public
    niu-lab/docker-flt3-itd’s past year of commit activity
    Python 6 GPL-3.0 0 1 0 Updated Feb 15, 2021
  • gclust Public

    genome sized sequences clustering

    niu-lab/gclust’s past year of commit activity
    C++ 13 Apache-2.0 3 4 0 Updated Dec 29, 2020
  • msisensor Public Forked from ding-lab/msisensor

    microsatellite instability detection using tumor only or paired tumor-normal data

    niu-lab/msisensor’s past year of commit activity
    C++ 5 MIT 55 0 0 Updated Sep 3, 2019
  • hotspot3d Public Forked from ding-lab/hotspot3d

    3D hotspot mutation proximity analysis tool

    niu-lab/hotspot3d’s past year of commit activity
    Perl 0 GPL-3.0 26 0 0 Updated Aug 22, 2019
  • GPyFlow-CLI Public

    a light way to run workflow

    niu-lab/GPyFlow-CLI’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 10, 2019
  • GPyFlow-Workflows Public

    a workflow platform to share workflow

    niu-lab/GPyFlow-Workflows’s past year of commit activity
    CSS 0 0 0 0 Updated Apr 17, 2019
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