Migrate to the latest FHIR SDK Artifacts (#3211)

* Add List Entry to Transform Services - StructureMap extraction * Migrate Engine, SDC and Knowledger artifacts * Test variable evaluation via cqf expressions (#3200) * set up the file * adds the intro part * adds how to work with today function * adds how to add dob as lower bound of date picker * concludes * update cqf expression documentation * revert location change * cleanup --------- Co-authored-by: ageryck <[email protected]> Co-authored-by: pld <[email protected]> * Fix Build 💚 --------- Co-authored-by: Brandy <[email protected]> Co-authored-by: ageryck <[email protected]> Co-authored-by: pld <[email protected]>
opensrp · Apr 23, 2024 · 5d72b3e · 5d72b3e
1 parent 4a365d3
commit 5d72b3e
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Showing 6 changed files with 12 additions and 15 deletions.
diff --git a/...e/src/main/java/org/smartregister/fhircore/engine/util/helper/TransformSupportServices.kt b/...e/src/main/java/org/smartregister/fhircore/engine/util/helper/TransformSupportServices.kt
@@ -28,6 +28,7 @@ import org.hl7.fhir.r4.model.Encounter
 import org.hl7.fhir.r4.model.EpisodeOfCare
 import org.hl7.fhir.r4.model.Group
 import org.hl7.fhir.r4.model.Immunization
+import org.hl7.fhir.r4.model.ListResource
 import org.hl7.fhir.r4.model.Location
 import org.hl7.fhir.r4.model.Observation
 import org.hl7.fhir.r4.model.Patient
@@ -81,6 +82,7 @@ class TransformSupportServices @Inject constructor(val simpleWorkerContext: Simp
       "Task_Restriction" -> Task.TaskRestrictionComponent()
       "AdverseEvent_SuspectEntity" -> AdverseEvent.AdverseEventSuspectEntityComponent()
       "Location_Position" -> Location.LocationPositionComponent()
+      "List_Entry" -> ListResource.ListEntryComponent()
       else -> ResourceFactory.createResourceOrType(name)
     }
   }

diff --git a/android/engine/src/test/java/org/smartregister/fhircore/engine/FhirExtractionTest.kt b/android/engine/src/test/java/org/smartregister/fhircore/engine/FhirExtractionTest.kt
@@ -16,13 +16,8 @@
 
 package org.smartregister.fhircore.engine
 
-import android.content.Context
-import androidx.test.core.app.ApplicationProvider
 import androidx.work.WorkManager
 import androidx.work.WorkRequest
-import ca.uhn.fhir.context.FhirContext
-import ca.uhn.fhir.context.FhirVersionEnum
-import ca.uhn.fhir.parser.IParser
 import com.google.android.fhir.FhirEngine
 import com.google.android.fhir.datacapture.mapping.ResourceMapper
 import com.google.android.fhir.datacapture.mapping.StructureMapExtractionContext
@@ -70,12 +65,10 @@ import org.smartregister.fhircore.engine.util.helper.TransformSupportServices
 class FhirExtractionTest : RobolectricTest() {
   @get:Rule(order = 0) val hiltRule = HiltAndroidRule(this)
   val fhirEngine: FhirEngine = mockk()
-  val context = ApplicationProvider.getApplicationContext<Context>()
 
   @Inject lateinit var transformSupportServices: TransformSupportServices
-  lateinit var structureMapUtilities: StructureMapUtilities
+  private lateinit var structureMapUtilities: StructureMapUtilities
   private val defaultRepository: DefaultRepository = mockk()
-  private val iParser: IParser = FhirContext.forCached(FhirVersionEnum.R4).newJsonParser()
 
   @Before
   fun setup() {
@@ -100,7 +93,6 @@ class FhirExtractionTest : RobolectricTest() {
           questionnaireResponse = questionnaireResponse,
           structureMapExtractionContext =
             StructureMapExtractionContext(
-              context = context,
               structureMapProvider = { _, _ -> resources.structureMap },
               transformSupportServices = transformSupportServices,
             ),
@@ -190,7 +182,6 @@ class FhirExtractionTest : RobolectricTest() {
           questionnaireResponse = questionnaireResponse,
           structureMapExtractionContext =
             StructureMapExtractionContext(
-              context = context,
               structureMapProvider = { _, _ -> resources.structureMap },
               transformSupportServices = transformSupportServices,
             ),

diff --git a/android/gradle/libs.versions.toml b/android/gradle/libs.versions.toml
@@ -16,14 +16,14 @@ android-x-test= "1.5.2"
 core-testing = "2.2.0"
 coverallsGradlePlugin = "2.12.0"
 cqfFhirCr = "3.0.0-PRE9"
-data-capture = "1.1.0-preview7-SNAPSHOT"
+data-capture = "1.1.0-preview8-SNAPSHOT"
 datastore = "1.0.0"
 desugar-jdk-libs = "2.0.4"
 dokkaBase = "1.8.20"
 easy-rules-jexl = "4.1.0"
 espresso-core = "3.5.1"
 fhir-common-utils = "1.0.0-SNAPSHOT"
-fhir-engine = "1.0.0-preview5-SNAPSHOT"
+fhir-engine = "1.0.0-preview7.1-SNAPSHOT"
 foundation = "1.6.3"
 fragment-ktx = "1.6.2"
 glide = "4.16.0"
@@ -37,7 +37,7 @@ jsonPath = "2.8.0"
 junit = "1.1.5"
 junit-jupiter = "5.9.1"
 junit-ktx = "1.1.5"
-knowledge = "0.1.0-alpha03-preview3.1-SNAPSHOT"
+knowledge = "0.1.0-alpha03-preview4-SNAPSHOT"
 kotlin = "1.9.22"
 kotlinx-coroutines = "1.7.3"
 kotlinx-serialization-json = "1.6.0"

diff --git a/android/quest/src/androidTest/java/org/smartregister/fhircore/quest/integration/Faker.kt b/android/quest/src/androidTest/java/org/smartregister/fhircore/quest/integration/Faker.kt
@@ -85,6 +85,12 @@ object Faker {
 
         override suspend fun purge(type: ResourceType, id: String, forcePurge: Boolean) {}
 
+        override suspend fun purge(
+          type: ResourceType,
+          ids: Set<String>,
+          forcePurge: Boolean,
+        ) {}
+
         override suspend fun <R : Resource> search(search: Search): List<SearchResult<R>> =
           emptyList()
 

diff --git a/...src/main/java/org/smartregister/fhircore/quest/ui/questionnaire/QuestionnaireViewModel.kt b/...src/main/java/org/smartregister/fhircore/quest/ui/questionnaire/QuestionnaireViewModel.kt
@@ -553,7 +553,6 @@ constructor(
             questionnaireResponse = questionnaireResponse,
             structureMapExtractionContext =
               StructureMapExtractionContext(
-                context = context,
                 transformSupportServices = transformSupportServices,
                 structureMapProvider = { structureMapUrl: String?, _: IWorkerContext ->
                   structureMapUrl?.substringAfterLast("/")?.let {

diff --git a/android/quest/src/test/java/org/smartregister/fhircore/quest/RegisterContentTest.kt b/android/quest/src/test/java/org/smartregister/fhircore/quest/RegisterContentTest.kt
@@ -55,7 +55,6 @@ class RegisterContentTest : RobolectricTest() {
     sourceGroup: String,
   ): StructureMapExtractionContext {
     return StructureMapExtractionContext(
-      context = context,
       transformSupportServices = transformSupportServices,
       structureMapProvider = { _: String, _: IWorkerContext ->
         StructureMapUtilities(worker, transformSupportServices)