REST API to serve data generated by Open Targets Library. It also serve the LINK tool UI at the root url.
can be run on aws lambda and google app engine flex
install requirements with
pip install -r requirements.txt
run locally with
python main.py
it requires two enviroment variables:
ES_MAIN_URL: URL for the elasticsearch node(s) storing all the dataES_GRAPH_URL: URL for the elasticsearch node(s) with the graph API enabled
make sure the following command is run in your elasticsearch to increase the sie of the graph LINK can handle
curl -XPUT 'http://elasticsearch_url:9200/pubmed-20-concept/_settings' -H 'Content-Type: application/json' -d'{"index" : {"max_adjacency_matrix_filters":500}}'
To deploy on AppEngine, just create a github release with a tag that starts with prod-*
All branches (including master) are deployed, tested with runscope but then are spun down to save cost.