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18 Open 9 Closed
18 Open 9 Closed
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Issues list

Tests fail when using the PYPI tarball because the 'data' module is missing
#53 opened Dec 6, 2024 by yurivict
pandas is imported but isn't listed in https://github.com/openvax/gtfparse
#52 opened Nov 12, 2024 by yurivict
DeprecationWarning: The argument dtypes for read_csv is deprecated.
#50 opened Oct 28, 2024 by dchen116
1
Error in gtfparse when calling vcf-expression-annotator
#49 opened Aug 26, 2024 by lukaas33
1
Update gtfparse to support pyarrow >=0.15
#47 opened May 9, 2024 by jdcla
3
ImportError: cannot import name table_to_blockmanager
#45 opened Jan 25, 2024 by gokceneraslan
1
Fix bug for records with ";" in the value
#44 opened Jan 17, 2024 by y9c
Bioconda wrong dependencies for version 2.1.0
#43 opened Dec 29, 2023 by jpintar
Please do not use logging basicConfig for library software
#40 opened Sep 13, 2023 by sjewell-biociphers
BackTrace for exception when parsing gtf file
#38 opened Aug 5, 2023 by borsheimFXBG
1
How to iter a huge gtf file line by line ?
#37 opened Jul 11, 2023 by galaxy001
read_gtf has ERROR "scan_csv() got an unexpected keyword argument 'sep'"
#36 opened Jun 11, 2023 by zbjbiubiubiu
9
Conversion to Pandas in read_gtf has missing dependency
#32 opened Feb 7, 2023 by acrinklaw
1
Attribute parsing fix
#23 opened Oct 14, 2021 by abreschi
Read_gtf but no write_gtf?
#21 opened Aug 20, 2021 by rsalz
5
gtfparse.parsing_error.ParsingError: Integer column has NA values in column 3
#19 opened Sep 7, 2020 by mictadlo
The column names are not correct
#16 opened Nov 14, 2018 by petrokvitka
Example of how to find a feature by gene_id or transcript_id
#13 opened Jun 26, 2018 by golharam
ProTip! Exclude everything labeled bug with -label:bug.