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30 Open 27 Closed
30 Open 27 Closed
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Issues list

ValueError: Invalid contig name 'chr1' for reference 'GRCh38
#89 opened Feb 24, 2022 by pswetha
The meaning of contains_mutant_residues
#88 opened Nov 22, 2018 by ysbioinfo
Request for inclusion of wild-type peptide binding affinity
#87 opened Oct 4, 2018 by ARChakravarthy
Request for Abbreviated HTML parameter/output
#80 opened Dec 1, 2017 by mikekubal
BLAST epitopes against reference proteome
#79 opened Nov 9, 2017 by iskandr
1
Get rid of "wildtype ligandome" dictionary
#78 opened Nov 9, 2017 by iskandr
Error in running topiary
#75 opened Sep 26, 2017 by bbhinder
Error: missing binding predictions
#74 opened Aug 26, 2017 by kevin199011
4
ValueError: Expected 484916 peptide predictions but got 267878 bug
#70 opened Apr 20, 2017 by ihodes
1
Cannot run Topairy on my dataset.
#65 opened Jan 18, 2017 by Akado2009
4
Optionally use isovar to construct coding/protein sequence
#62 opened Sep 27, 2016 by iskandr
4
Wildtype peptide sequence
#58 opened Jun 9, 2016 by iskandr
VCF annotation
#56 opened Jun 1, 2016 by serge2016
9
Replace "self-ligandome" filtering with just search over the full proteome
#49 opened May 5, 2016 by iskandr
5
Don't seem to be filtering stop-gain variants
#48 opened May 5, 2016 by iskandr
4
Clarify what NetMHC* versions are supported enhancement
#45 opened Mar 1, 2016 by tavinathanson
Invalid percentile rank epitopes
#42 opened Feb 8, 2016 by rschenck
5
Topiary w/ NetMHC Fails
#41 opened Dec 17, 2015 by JPFinnigan
13
Fix readthedocs build
#37 opened Oct 15, 2015 by iskandr
6
output Core from netmhciipan
#36 opened Sep 10, 2015 by kippakers
2
Integrating multiple predictions per peptide
#35 opened Sep 3, 2015 by iskandr
Add tests for fields of EpitopePrediction
#34 opened Sep 2, 2015 by iskandr
Add the topiary script to the user's path during topiary installation enhancement
#32 opened Aug 31, 2015 by tavinathanson
mutant_epitope_predictor.epitopes_from_variants needs a test bug
#24 opened Aug 26, 2015 by tavinathanson
write proper HTML output
#18 opened Jul 22, 2015 by timodonnell
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