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    8 repositories

    • PhysiBoSS

      Public
      PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks
      C++
      •100•23•0•0•Updated Dec 3, 2024Dec 3, 2024

    • physiboss.github.io

      Public
      HTML
      •0•0•0•0•Updated Jun 28, 2024Jun 28, 2024

    • pctk

      Public
      A set of scripts and utilities to analyze PhysiCell/PhysiBoSS simulations
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•3•0•0•Updated Feb 5, 2024Feb 5, 2024

    • PROFILE_v2

      Public
      A repository of code and analyses related to the paper "Patient-specific Boolean models of signaling networks guide personalized treatments".
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •3•1•0•0•Updated Aug 30, 2023Aug 30, 2023

    • boolean-models

      Public
      A model repository of published Boolean models of cell signaling and regulatory networks.
      BSD 3-Clause "New" or "Revised" License
      •0•3•0•0•Updated Jan 23, 2023Jan 23, 2023

    • tools4PhysiBoSS-Drugs

      Public
      Scripts needed to perform drug simulations with PhysiBoSS-Drugs (https://github.com/anmeert/PhysiBoSSv2) and to perform the data analysis of my master thesis "PhysiBoSS-Drugs: A customizable drug simulation framework that enables predicting drug synergies in cell populations”.
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jun 20, 2022Jun 20, 2022

    • spheroid-tnf-v2-emews

      Public
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated Apr 11, 2022Apr 11, 2022

    • PhysiBoSSv1

      Public
      Multiscale simulation of multi-cellular system
      C++
      •
      Other
      •11•0•0•0•Updated Jul 31, 2020Jul 31, 2020