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    80 repositories

    • agr_pavi

      Public
      AGR Proteins Annotations and Variants Inspector
      CSS
      •
      MIT License
      •0•0•0•9•Updated Feb 17, 2025Feb 17, 2025

    • agr_curation

      Public
      CSS
      •
      MIT License
      •1•2•0•0•Updated Feb 15, 2025Feb 15, 2025

    • agr_literature_service

      Public
      Alliance Bibliographic Corpus (ABC) Manager
      Python
      •
      MIT License
      •1•1•0•0•Updated Feb 15, 2025Feb 15, 2025

    • agr_literature_ui

      Public
      This is a react app for displaying information for curation from Alliance resources (Demo)
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

    • agr_document_classifier

      Public
      Python
      •
      MIT License
      •0•0•0•1•Updated Feb 14, 2025Feb 14, 2025

    • agr_ui

      Public
      JavaScript
      •9•14•1•1•Updated Feb 14, 2025Feb 14, 2025

    • agr_ferret

      Public
      Alliance of Genome Resources pre-ETL file fetching software.
      Python
      •
      MIT License
      •3•2•0•0•Updated Feb 14, 2025Feb 14, 2025

    • agr_db_backups

      Public
      Python
      •0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

    • agr_java_software

      Public
      Java
      •
      MIT License
      •5•1•0•1•Updated Feb 14, 2025Feb 14, 2025

    • agr_chipmunk

      Public
      Java
      •
      MIT License
      •6•2•0•7•Updated Feb 13, 2025Feb 13, 2025

    • agr_mati

      Public
      Minting and Tracking Identifiers (MaTI)
      Java
      •
      MIT License
      •0•2•0•0•Updated Feb 13, 2025Feb 13, 2025

    • agr_intermine_builder

      Public
      Build intermine containers required for AllianceMine
      Shell
      •
      MIT License
      •3•0•0•1•Updated Feb 11, 2025Feb 11, 2025

    • agr_ansible_devops

      Public
      Jinja
      •
      MIT License
      •0•2•0•0•Updated Feb 11, 2025Feb 11, 2025

    • agr_base_linux_env

      Public
      Dockerfile
      •
      MIT License
      •3•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • agr_preprocess

      Public
      Python
      •
      MIT License
      •3•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • agr_file_generator

      Public
      This repo is for generating files from Alliance resources
      Python
      •
      MIT License
      •3•1•0•1•Updated Feb 11, 2025Feb 11, 2025

    • agr_loader

      Public
      Data loader for the Alliance of Genome Resources website.
      Python
      •
      MIT License
      •5•1•0•1•Updated Feb 11, 2025Feb 11, 2025

    • agr_amplify_jbrowse2

      Public
      Repo to build JBrowse 2 with AWS Amplify
      Perl
      •
      MIT License
      •0•1•0•0•Updated Feb 11, 2025Feb 11, 2025

    • agr_textpresso

      Public
      C++
      •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • agr_grobid_ebdeploy

      Public
      Makefile
      •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

    • agr_jbrowse_gff

      Public
      Tools for processing Alliance GFF into JBrowse NCList
      Perl
      •
      MIT License
      •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

    • agr_jbrowse_vcf

      Public
      Tools for processing VCF data for JBrowse
      Shell
      •
      MIT License
      •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

    • agr_genedescriptions

      Public
      Concise gene descriptions generator
      Python
      •
      MIT License
      •3•3•0•0•Updated Jan 28, 2025Jan 28, 2025

    • agr_blast_service_configuration

      Public
      This repo is used to configure the Alliance Blast Service
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 23, 2025Jan 23, 2025

    • agr_curation_schema

      Public
      Schema repository for the Alliance of Genome Resources persistent data store
      linkmlalliance-curationalliance-of-genome-resources
      Makefile
      •
      MIT License
      •1•7•0•1•Updated Jan 15, 2025Jan 15, 2025

    • agr_schemas

      Public
      A repository of JSON schemas for incorporating data into the Alliance of Genome Resources.
      Python
      •
      MIT License
      •9•7•0•0•Updated Jan 14, 2025Jan 14, 2025

    • agr_jbrowse_container

      Public
      Docker image of JBrowse Genome Browser
      Dockerfile
      •
      MIT License
      •17•0•0•0•Updated Jan 7, 2025Jan 7, 2025

    • agr_alliancemine_ebdeploy

      Public
      Makefile
      •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

    • agr_sentence_classifier

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 19, 2024Dec 19, 2024

    • agr_blastdb_manager

      Public
      A tool for aggregating and generating Alliance BLAST databases.
      Python
      •
      MIT License
      •0•1•0•0•Updated Dec 16, 2024Dec 16, 2024