Chan Zuckerberg Initiative

All

256 repositories

happy
Public
Happy Path Deployment Tool
kubernetes infrastructure terraform
Go
•
MIT License
•3•18•13•9•Updated Feb 10, 2025Feb 10, 2025
camelot
Public
Go
•
MIT License
•0•1•0•2•Updated Feb 10, 2025Feb 10, 2025
cellxgene-ontology-guide
Public
Notebook guide: https://github.com/chanzuckerberg/cellxgene-ontology-guide/blob/main/api/python/notebooks/Python%20API.ipynb
Python
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MIT License
•1•7•8•5•Updated Feb 10, 2025Feb 10, 2025
single-cell-data-portal
Public
The data portal supporting the submission, exploration, and management of projects and datasets to cellxgene.
TypeScript
•
MIT License
•14•65•268•18•Updated Feb 9, 2025Feb 9, 2025
cryoet-data-portal
Public
CryoET Data Portal
TypeScript
•
MIT License
•11•21•271•11•Updated Feb 8, 2025Feb 8, 2025
cryoet-data-portal-neuroglancer
Public
CryoET Data Portal Neuroglancer configuration helper
Python
•
MIT License
•2•1•1•6•Updated Feb 7, 2025Feb 7, 2025
homebrew-tap
Public
Ruby
•2•3•2•0•Updated Feb 7, 2025Feb 7, 2025
argus-artifacts
Public
MIT License
•0•1•0•0•Updated Feb 7, 2025Feb 7, 2025
single-cell-curation
Public
Code and documentation for the curation of cellxgene datasets
Python
•
MIT License
•25•39•48•6•Updated Feb 7, 2025Feb 7, 2025
argo-helm-charts
Public
Smarty
•0•0•0•2•Updated Feb 7, 2025Feb 7, 2025
aws-oidc
Public
AWS OIDC Federation
Go
•
MIT License
•5•15•1•2•Updated Feb 7, 2025Feb 7, 2025
cellxgene-census
Public
CZ CELLxGENE Discover Census
Jupyter Notebook
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MIT License
•23•93•119•17•Updated Feb 7, 2025Feb 7, 2025
cryoet-data-portal-backend
Public
CryoET Data Portal API server & ingestion scripts
Python
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MIT License
•2•3•6•8•Updated Feb 7, 2025Feb 7, 2025
czid-graphql-federation-server
Public
GraphQL Mesh server for CZ ID
TypeScript
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MIT License
•0•0•0•2•Updated Feb 7, 2025Feb 7, 2025
cztack
Public
The CZI infrastructure stack.
HCL
•
MIT License
•25•65•3•5•Updated Feb 7, 2025Feb 7, 2025
czid-platformics
Public
Python
•
MIT License
•2•4•0•11•Updated Feb 7, 2025Feb 7, 2025
delta-share-artifacts
Public
MIT License
•0•0•0•0•Updated Feb 7, 2025Feb 7, 2025
fogg
Public
Manage Infrastructure as Code with less pain.
terraform infrastructure-as-code infrastructure
Go
•
MIT License
•20•298•38•5•Updated Feb 7, 2025Feb 7, 2025
go-misc
Public
miscellaneous go code
Go
•
MIT License
•3•7•1•1•Updated Feb 7, 2025Feb 7, 2025
single-cell-explorer
Public
Hosted version of cellxgene
TypeScript
•
MIT License
•3•12•61•3•Updated Feb 7, 2025Feb 7, 2025
sci-components
Public
2021 Science Design System Component Library
react css theme design-system
TypeScript
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MIT License
•7•28•108•4•Updated Feb 6, 2025Feb 6, 2025
github-actions
Public
A collection of re-usable GitHub Actions
HCL
•
MIT License
•4•5•1•7•Updated Feb 6, 2025Feb 6, 2025
platformics
Public
Codegen Python GraphQL Entity Framework
Python
•
MIT License
•0•3•14•1•Updated Feb 5, 2025Feb 5, 2025
edu-design-system
Public
Design system for Education Projects
react design-system style-dictionary
TypeScript
•
MIT License
•4•29•1•1•Updated Feb 4, 2025Feb 4, 2025
blessclient
Public
Go client to negotiate SSH certificates
czi ssh certificate rsync scp ssh-agent
Go
•
MIT License
•17•64•8•2•Updated Feb 3, 2025Feb 3, 2025
czid-web
Public
Infectious Disease Sequencing Platform
science research biology sequencing computational-biology next-generation-sequencing bioinformatics-pipeline global-health virology infectious-diseases
TypeScript
•
MIT License
•24•84•0•2•Updated Jan 30, 2025Jan 30, 2025
czid-workflows
Public
Portable WDL workflows for CZ ID production pipelines
Python
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MIT License
•7•42•3•8•Updated Jan 30, 2025Jan 30, 2025
axe-storybook-testing
Public
Command line interface for testing Storybook stories for accessibility.
accessibility axe testing
TypeScript
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MIT License
•7•52•0•0•Updated Jan 28, 2025Jan 28, 2025
napari-hub
Public
Discover, install, and share napari plugins
python tracking machine-learning deep-learning analysis detection plugins themes registration segmentation
TypeScript
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MIT License
•18•51•97•10•Updated Jan 28, 2025Jan 28, 2025
open-science
Public
curated links and customized materials to support biomedical researchers in implementing open science approaches
training open-source computational-biology open-science reproducibility biomedical-research reproducible-computational-methods
JavaScript
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Other
•2•8•33•0•Updated Jan 24, 2025Jan 24, 2025