Repositories list

• hello-wdl-workflow

  Public
  WDL

  •5•0•0•1•Updated Dec 10, 2024Dec 10, 2024

• dockstore-workflow-md5sum-unified

  Public
  Common Workflow Language

  •8•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• dockstore-tool-md5sum

  Public
  A very simple tool that just performs an md5sum

  Common Workflow Language

  •

  Apache License 2.0

  •15•0•0•0•Updated Dec 6, 2024Dec 6, 2024

• mutect-tool

  Public
  Python

  •6•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• dockstore-tool-linux-sort

  Public
  From https://github.com/common-workflow-language/workflows

  Common Workflow Language

  •2•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• galaxy-workflow-dockstore-example-2

  Public
  6•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• workflow-dockstore-yml

  Public
  A repo that includes .dockstore.yml

  Common Workflow Language

  •

  Apache License 2.0

  •6•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• test-service

  Public
  3•0•0•0•Updated Aug 9, 2024Aug 9, 2024

• ampa-nf

  Public
  Fast automated prediction of protein antimicrobial regions

  Perl

  •6•0•0•0•Updated Jul 29, 2024Jul 29, 2024

• large-sourcefiles

  Public
  Common Workflow Language

  •2•0•0•0•Updated Jul 9, 2024Jul 9, 2024

• multi-entry

  Public
  A Dockstore repo with two tools, two workflows, and a .dockstore.yml. All entries on the main branch will register successfully, other branches generally tweak the repo to test different failure conditions.

  Common Workflow Language

  •2•0•0•0•Updated Jun 10, 2024Jun 10, 2024

• sourcefile-testing

  Public
  Jupyter Notebook

  •2•0•0•0•Updated Jun 3, 2024Jun 3, 2024

• simple-notebook

  Public
  Jupyter Notebook

  •6•0•0•0•Updated Feb 15, 2024Feb 15, 2024

• blank_testing

  Public
  0•0•0•0•Updated Aug 29, 2023Aug 29, 2023

• wdl-humanwgs

  Public
  Testing for submodule compatibility

  WDL

  •

  BSD 3-Clause Clear License

  •31•0•0•0•Updated Aug 29, 2023Aug 29, 2023

• wdl-common

  Public
  Supports https://github.com/dockstore-testing/wdl-humanwgs

  WDL

  •

  BSD 3-Clause Clear License

  •6•0•0•0•Updated Jul 31, 2023Jul 31, 2023

• wdl-humanwgs-child

  Public
  Supports https://github.com/dockstore-testing/wdl-common/tree/main/wdl

  WDL

  •0•0•0•0•Updated Jul 31, 2023Jul 31, 2023

• test-workflows-and-tools

  Public
  Common Workflow Language

  •11•0•0•0•Updated Jul 24, 2023Jul 24, 2023

• testWorkflow

  Public
  Shell

  •

  Apache License 2.0

  •1•0•0•0•Updated May 12, 2023May 12, 2023

• tooltester-wes-testing

  Public
  Common Workflow Language

  •

  Apache License 2.0

  •3•0•0•0•Updated May 11, 2023May 11, 2023

• one-workflow-many-ways

  Public
  Implementing bamqc over and over again

  Shell

  •

  MIT License

  •7•0•0•0•Updated May 8, 2023May 8, 2023

• WES-testing-workflows

  Public
  Workflows for testing Dockstore CLI WES commands

  Apache License 2.0

  •0•0•0•0•Updated May 8, 2023May 8, 2023

• rodent-of-unusual-size

  Public
  Test repo with amazing number of branches

  Java

  •

  Other

  •594•0•0•0•Updated Jan 31, 2023Jan 31, 2023

• nextflow-broken

  Public
  A Nextflow workflow that is not valid in various ways.

  Nextflow

  •1•0•0•0•Updated Dec 27, 2022Dec 27, 2022

• recursive-wdl

  Public
  WDL

  •1•0•0•0•Updated Dec 21, 2022Dec 21, 2022

• gatk-sv-clinical

  Public
  WDLs for the Clinical GATK-SV pipeline

  WDL

  •

  BSD 3-Clause "New" or "Revised" License

  •5•0•0•0•Updated Oct 3, 2022Oct 3, 2022

• test_workflow_cwl

  Public
  Common Workflow Language

  •2•0•0•0•Updated Aug 8, 2022Aug 8, 2022

• hello-dockstore-workflow

  Public
  test repo for CWL and WDL workflows

  Apache License 2.0

  •7•0•0•0•Updated Aug 8, 2022Aug 8, 2022

• wes-testing

  Public
  This repo houses testing workflows for the Dockstore CLI's WES integration

  WDL

  •3•1•0•0•Updated Mar 14, 2022Mar 14, 2022

• dockstore-whalesay2

  Public
  Sample dockstore whalesay repo for testing

  WDL

  •

  Apache License 2.0

  •11•0•0•0•Updated Mar 3, 2022Mar 3, 2022