Repositories list

• AGRdatafeedPS

  Public
  Datafeed for the Alliance persistent store.

  Python

  •0•0•0•0•Updated Feb 25, 2025Feb 25, 2025

• femover

  Public
  Move Data from MGD into FE

  Python

  •0•0•0•0•Updated Feb 25, 2025Feb 25, 2025

• loadadmin

  Public
  Shell

  •0•0•0•0•Updated Feb 25, 2025Feb 25, 2025

• mgihome

  Public
  Python

  •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• genemodelload

  Public
  MGI load: Gene Model

  Python

  •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• mrkcoordload

  Public
  MGI load: Marker Coordinates

  Python

  •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• seqcacheload

  Public
  MGI cache load: Sequence

  Python

  •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• qcreports_db

  Public
  MGI reports : qc/curators

  Python

  •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

• autolittriage

  Public
  Using machine learning to automate literature triage tasks

  Python

  •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

• imsr-etl

  Public
  IMSR - Extract, Transform and Load: reads data files from repositories, merges data from mgi and loads the data into a solr index for www.findmice.org

  Java

  •0•0•0•5•Updated Feb 20, 2025Feb 20, 2025

• mgisolr

  Public
  Contains solr index definitions for MGI products

  Shell

  •0•0•0•0•Updated Feb 19, 2025Feb 19, 2025

• mammalian-phenotype-ontology

  Public
  Standard terms for annotating mammalian phenotypic data

  jsonowlontology+ 5obophenotypingphenotypemammalsobofoundry

  Makefile

  •

  Creative Commons Attribution 4.0 International

  •6•19•256•1•Updated Feb 19, 2025Feb 19, 2025

• fewi

  Public
  Front End Web Interface

  Java

  •1•2•0•8•Updated Feb 18, 2025Feb 18, 2025

• fedatamodel

  Public
  Hibernate ORM

  Java

  •0•0•0•0•Updated Feb 18, 2025Feb 18, 2025

• wts_archive

  Public
  Web-accessible tool for searching archived tracking records (TRs) from the old Work Tracking System (WTS)

  Python

  •0•0•0•0•Updated Feb 18, 2025Feb 18, 2025

• gxdhtload

  Public
  GXD High Throughput Raw Data Load

  Python

  •0•0•0•0•Updated Feb 18, 2025Feb 18, 2025

• pdfdownload

  Public
  Automates downloading of desired PDF files for articles from selected journals.

  Python

  •0•0•0•0•Updated Feb 12, 2025Feb 12, 2025

• doc_root

  Public
  This repo will become the root of the MGI website.

  Python

  •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• snpcacheload

  Public
  MGI cache load: SNP

  Python

  •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

• pgsnpdbschema

  Public
  MGI database : SNP

  Shell

  •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

• iphone_server

  Public
  Python

  •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• mousemine

  Public
  Java

  •1•3•1•2•Updated Feb 4, 2025Feb 4, 2025

• mirror_wget

  Public
  Shell

  •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• mgidbmigration

  Public
  Shell

  •0•0•0•0•Updated Jan 31, 2025Jan 31, 2025

• mgigff3

  Public
  Pipeline for generating the MGI.gff3 file.

  Python

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• littriageload

  Public
  MGI load : Literature Triage load

  Python

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• vlad

  Public
  Web based enrichment tool.

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• pdfviewer

  Public
  web-based access to PDF files stored locally at MGI

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• lib_py_littriage

  Public
  Contains libraries necessary for literature triage, supporting relevant data loads and curatorial interfaces.

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• mousemine_etl

  Public
  Python

  •0•2•0•0•Updated Jan 22, 2025Jan 22, 2025