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Added option to choose colormap for labelled videos #211

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merged 2 commits into from
Nov 4, 2024

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hummuscience
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I wanted to change the standard colormap for the labelled videos ("cool") is it is harder to differentiate keypoints when the number is larger. So I added the option to choose the colormap in the yaml file.

lightning_pose/utils/scripts.py Outdated Show resolved Hide resolved
@hummuscience
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hummuscience commented Nov 4, 2024

Added the change. Is it reasonable to update all the example config files with the option?

It might make sense to update the config file docs at some point with all the other options (including the colormap).

I always liked this page from suite2p that listed all possible settings so things like training.uniform_heatmaps_for_nan_keypoints
are easier to find

@themattinthehatt
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@hummuscience thanks for the PR - would you mind submitting a new issue about the missing config options? It's a good idea to update the docs, I can take care of that soon.

@themattinthehatt themattinthehatt merged commit 4f653c5 into paninski-lab:main Nov 4, 2024
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2 participants