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bug fix for hto demulitplexing
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this bug was causing mark_hto_identities to fail. No impact where results were delivered.
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parashardhapola committed Jan 24, 2024
1 parent 60e04f1 commit 095734d
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2 changes: 1 addition & 1 deletion VERSION
Original file line number Diff line number Diff line change
@@ -1 +1 @@
0.28.8
0.28.9
2 changes: 1 addition & 1 deletion scarf/datastore/datastore.py
Original file line number Diff line number Diff line change
Expand Up @@ -195,7 +195,7 @@ def mark_hto_identities(
assay.rawData[self.cells.fetch_all(cell_key)], self.nthreads
)
hto_idents = hto_demux(
pd.DataFrame(counts, columns=assay.feats.fetch("ids", key=cell_key))
pd.DataFrame(counts, columns=assay.feats.fetch_all("ids"))
)
self.cells.insert(
column_name=label,
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