added tests for topacedo, shade plotting and to_anndata. Added depend…

…encies to GH actions config.
parashardhapola · Jul 17, 2021 · 22988be · 22988be
1 parent 51856b3
commit 22988be
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diff --git a/.github/workflows/pytest.yml b/.github/workflows/pytest.yml
@@ -26,8 +26,9 @@ jobs:
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install pytest pytest-cov
+        pip install pytest pytest-cov topacedo anndata
         pip install -r requirements.txt
+        pip install pip install git+https://github.com/fraenkel-lab/pcst_fast.git@deb3236cc26ee9fee77d5af40fac3f12bb753850
     - name: Test with pytest
       run: |
         pytest --cov=.