fixed bug in ZarrMerge that led to omission of appending sample name

parashardhapola · Jul 8, 2021 · db09235 · db09235
1 parent 59c98ee
commit db09235
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/scarf/writers.py b/scarf/writers.py
@@ -755,6 +755,7 @@ def _merge_cell_table(self, reset, prepend_text):
         ret_val = []
         for assay, name in zip(self.assays, self.names):
             a = assay.cells.to_pandas_dataframe(assay.cells.columns)
+            a['ids'] = [f"{name}__{x}" for x in a['ids']]
             for i in a.columns:
                 if i not in ['ids', 'I', 'names'] and prepend_text is not None:
                     a[f"{prepend_text}_{i}"] = assay.cells.fetch_all(i)