Skip to content

Commit

Permalink
0058 domain example (#80)
Browse files Browse the repository at this point in the history
* Update snapshot after upgrade the admiraldev

* Closes #58

- Update `domain_example()` documentation

* Update word list

* Update `mutate.cnd_df()` docs
  • Loading branch information
ramiromagno authored Jul 30, 2024
1 parent b2cad05 commit ac83562
Show file tree
Hide file tree
Showing 4 changed files with 11 additions and 46 deletions.
27 changes: 4 additions & 23 deletions R/domain_example.R
Original file line number Diff line number Diff line change
Expand Up @@ -18,29 +18,10 @@
#'
#' ### Example SDTM domains
#'
#' \describe{
#' \item{`"ae_ophtha"`}{Ophthalmology Adverse Events Dataset.}
#' \item{`"ae"`}{Adverse Events Dataset-updated.}
#' \item{`"ce_vaccine"`}{Clinical Events Dataset for Vaccine Studies.}
#' \item{`"cm"`}{Concomitant Medication Dataset.}
#' \item{`"dm_vaccine"`}{Demographics Dataset for Vaccine Studies.}
#' \item{`"dm"`}{Demography Dataset.}
#' \item{`"ds"`}{Disposition Dataset-updated.}
#' \item{`"eg"`}{ Electrocardiogram Dataset.}
#' \item{`"ex_ophtha"`}{Ophthalmology Exposure Dataset.}
#' \item{`"ex_vaccine"`}{Exposures Dataset for Vaccine Studies.}
#' \item{`"ex"`}{Exposure Dataset.}
#' \item{`"face_vaccine"`}{Findings About Clinical Events Dataset for Vaccine Studies.}
#' \item{`"is_vaccine"`}{Immunogenicity Specimen Assessments Dataset for Vaccine Studies.}
#' \item{`"lb"`}{Laboratory Measurements Dataset.}
#' \item{`"mh"`}{Medical History Dataset-updated.}
#' \item{`"oe_ophtha"`}{Ophthalmology Adverse Events Dataset.}
#' \item{`"pc"`}{Pharmacokinetics Concentrations Dataset.}
#' \item{`"pp"`}{Pharmacokinetics Parameters Dataset.}
#' \item{`"qs_ophtha"`}{Ophthalmology Questionnaire Dataset.}
#' \item{`"rs_onco_irecist"`}{Disease Response Dataset (iRECIST).}
#' \item{`"rs_onco"`}{Disease Response Dataset.}
#' }
#' - `"ae"`: Adverse Events (AE) data set.
#' - `"apsc"`: Associated Persons Subject Characteristics (APSC) data set.
#' - `"cm"`: Concomitant Medications (CM) data set.
#' - `"vs"`: Vital Signs (VS) data set.
#'
#' @param example A string with either the basename, file name, or relative path
#' to a SDTM domain example file bundled with `{stdm.oak}`, e.g. `"cm"`
Expand Down
1 change: 1 addition & 0 deletions _pkgdown.yml
Original file line number Diff line number Diff line change
Expand Up @@ -27,6 +27,7 @@ reference:
- condition_add
- ctl_new_rowid_pillar.cnd_df
- tbl_sum.cnd_df
- mutate.cnd_df

- title: SDTM examples
desc: SDTM domain file examples
Expand Down
1 change: 1 addition & 0 deletions inst/WORDLIST
Original file line number Diff line number Diff line change
Expand Up @@ -64,3 +64,4 @@ RFSTDTC
RFXSTDTC
TPT
xxTPT
APSC
28 changes: 5 additions & 23 deletions man/domain_example.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

0 comments on commit ac83562

Please sign in to comment.