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  1. EpitopeMatcher EpitopeMatcher Public

    A package that can be used to find out how well the epitopes in a patient's virus' will be recognized by the HLA's present in the patient.

    R 1 2

  2. hdsResistanceModel hdsResistanceModel Public

    A Hybrid Dynamic/Stochastic Model of HIV Resistance Evolution

    R

  3. hypermutR hypermutR Public

    R implementation of hypermut 2.0 algorithm

    R 3

  4. tsic tsic Public

    Time since infection calculator

    R 1 1

  5. MotifBinner2 MotifBinner2 Public

    Software for processing PID/barcoded Illumina sequence data

    R