NAMESPACE

# Generated by roxygen2: do not edit by hand

export(.LANL_HLA_data)
export(.Patient_HLA)
export(.Scoring_Job)
export(.sequence_comparison_stats)
export(build_scoring_jobs)
export(epitope_found)
export(find_epitope_in_ref)
export(flatten_lanl_hla)
export(get_epitope)
export(get_hla_details)
export(get_hla_genotype)
export(get_patient_ids)
export(get_set_of_test_data)
export(get_test_lanl_hla_data)
export(get_test_patient_hla_data)
export(get_test_query_alignment)
export(list_scores_to_compute)
export(match_epitopes)
export(match_patient_hla_to_query_alignment)
export(read_lanl_hla)
export(read_patient_hla)
export(read_query_alignment)
export(run_EpitopeMatcher_app)
export(score_all_epitopes)
export(score_epitope)
exportClasses(LANL_HLA_data)
exportClasses(Patient_HLA)
exportClasses(Scoring_Job)
import(Biostrings)
import(digest)
import(methods)
import(testthat)
importFrom(shiny,runApp)