Necessary changes that were left behind due to recent updates

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Codecov Report

Attention: Patch coverage is 60.00000% with 2 lines in your changes missing coverage. Please review.

Project coverage is 73.23%. Comparing base (79725c8) to head (5e90c25).
Report is 14 commits behind head on develop.

Files with missing lines	Patch %	Lines
src/phelel/file_IO.py	0.00%	1 Missing ⚠️
src/phelel/velph/cli/phono3py/init.py	66.66%	1 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##           develop      #22      +/-   ##
===========================================
- Coverage    73.42%   73.23%   -0.19%     
===========================================
  Files           74       74              
  Lines         5223     5280      +57     
===========================================
+ Hits          3835     3867      +32     
- Misses        1388     1413      +25     

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