paragraph stubs

[ci skip] This build is based on ebf66ec. This commit was created by the following CI build and job: https://github.com/plantbreeding/BrAPI-Manuscript2/commit/ebf66ecb1f633626ae55b0df5256d6898f558d76/checks https://github.com/plantbreeding/BrAPI-Manuscript2/actions/runs/7994623734
plantbreeding · Feb 21, 2024 · 337bccf · 337bccf
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diff --git a/manuscript.html b/manuscript.html
@@ -60,8 +60,8 @@
   <meta name="dc.date" content="2024-02-21" />
   <meta name="citation_publication_date" content="2024-02-21" />
   <meta property="article:published_time" content="2024-02-21" />
-  <meta name="dc.modified" content="2024-02-21T19:28:01+00:00" />
-  <meta property="article:modified_time" content="2024-02-21T19:28:01+00:00" />
+  <meta name="dc.modified" content="2024-02-21T19:41:01+00:00" />
+  <meta property="article:modified_time" content="2024-02-21T19:41:01+00:00" />
   <meta name="dc.language" content="en-US" />
   <meta name="citation_language" content="en-US" />
   <meta name="dc.relation.ispartof" content="Manubot" />
@@ -96,9 +96,9 @@
   <meta name="citation_fulltext_html_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/" />
   <meta name="citation_pdf_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
   <link rel="alternate" type="application/pdf" href="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
-  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/" />
-  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/" />
-  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/manuscript.pdf" />
+  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/" />
+  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/" />
+  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/manuscript.pdf" />
   <meta property="og:type" content="article" />
   <meta property="twitter:card" content="summary_large_image" />
   <link rel="icon" type="image/png" sizes="192x192" href="https://manubot.org/favicon-192x192.png" />
@@ -115,9 +115,9 @@ <h1 class="title">BrAPI Success Stories</h1>
 </header>
 <p><small><em>
 This manuscript
-(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/">permalink</a>)
+(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/">permalink</a>)
 was automatically generated
-from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/7d41af144f69824a6b6334fc8801b324d5754e0c">plantbreeding/BrAPI-Manuscript2@7d41af1</a>
+from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/ebf66ecb1f633626ae55b0df5256d6898f558d76">plantbreeding/BrAPI-Manuscript2@ebf66ec</a>
 on February 21, 2024.
 </em></small></p>
 <h2 id="authors">Authors</h2>
@@ -315,9 +315,9 @@ <h4 id="agent">AGENT</h4>
 <h4 id="ipk-genebank">IPK-Genebank</h4>
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
 <p>Agrosystem Integration of germplasm collections in context of data trustee models among private economy and public research, integration of ex-situ genebanks (EU H2020 projects AGENT, INCREASING), integrated agrosystems and plant research infrastructure</p>
-<h4 id="miappe-isa-tab2brapi-service">MIAPPE ISA-TAB2BRAPI service</h4>
+<h4 id="miappe-brapi-to-isa-service">MIAPPE “BrAPI to ISA” service</h4>
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
-<p>MIAPPE and BrAPI are designed to be inter-compatible. ISA-TAB is a file based implementation of MIAPPE. The ISA-TAB2BRAPI service is a converter between the ISA-TAB files and the BrAPI RESTful endpoints.</p>
+<p>MIAPPE and BrAPI are designed to be inter-compatible. ISA-TAB is a file based implementation of MIAPPE. The “BrAPI to ISA” service is a converter between the ISA-TAB files and the BrAPI RESTful endpoints.</p>
 <h3 id="data-visualization">Data visualization</h3>
 <!-- 
 * General use case description(s)
@@ -339,6 +339,9 @@ <h4 id="trait-selector-brapp">Trait Selector BrAPP</h4>
 <h4 id="dartview">DArTView</h4>
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
 <p>DArTView is a desktop application for visualizing genotype variant data and looking for trends or correlations. It is newly BrAPI compatible and can use BrAPI as an input data source.</p>
+<h4 id="divbrowse">DivBrowse</h4>
+<!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
+<p>DivBrowse is a BrAPI compatible tool for visualizing genotype variant data.</p>
 <h3 id="analytics">Analytics</h3>
 <!-- 
 * General use case description(s)

diff --git a/manuscript.md b/manuscript.md
@@ -31,8 +31,8 @@ header-includes: |
   <meta name="dc.date" content="2024-02-21" />
   <meta name="citation_publication_date" content="2024-02-21" />
   <meta property="article:published_time" content="2024-02-21" />
-  <meta name="dc.modified" content="2024-02-21T19:28:01+00:00" />
-  <meta property="article:modified_time" content="2024-02-21T19:28:01+00:00" />
+  <meta name="dc.modified" content="2024-02-21T19:41:01+00:00" />
+  <meta property="article:modified_time" content="2024-02-21T19:41:01+00:00" />
   <meta name="dc.language" content="en-US" />
   <meta name="citation_language" content="en-US" />
   <meta name="dc.relation.ispartof" content="Manubot" />
@@ -67,9 +67,9 @@ header-includes: |
   <meta name="citation_fulltext_html_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/" />
   <meta name="citation_pdf_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
   <link rel="alternate" type="application/pdf" href="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
-  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/" />
-  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/" />
-  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/manuscript.pdf" />
+  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/" />
+  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/" />
+  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/manuscript.pdf" />
   <meta property="og:type" content="article" />
   <meta property="twitter:card" content="summary_large_image" />
   <link rel="icon" type="image/png" sizes="192x192" href="https://manubot.org/favicon-192x192.png" />
@@ -91,9 +91,9 @@ manubot-clear-requests-cache: false
 
 <small><em>
 This manuscript
-([permalink](https://plantbreeding.github.io/BrAPI-Manuscript2/v/7d41af144f69824a6b6334fc8801b324d5754e0c/))
+([permalink](https://plantbreeding.github.io/BrAPI-Manuscript2/v/ebf66ecb1f633626ae55b0df5256d6898f558d76/))
 was automatically generated
-from [plantbreeding/BrAPI-Manuscript2@7d41af1](https://github.com/plantbreeding/BrAPI-Manuscript2/tree/7d41af144f69824a6b6334fc8801b324d5754e0c)
+from [plantbreeding/BrAPI-Manuscript2@ebf66ec](https://github.com/plantbreeding/BrAPI-Manuscript2/tree/ebf66ecb1f633626ae55b0df5256d6898f558d76)
 on February 21, 2024.
 </em></small>
 
@@ -363,10 +363,10 @@ BraPI endpoints for AGENT
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
 Agrosystem Integration of germplasm collections in context of data trustee models among private economy and public research, integration of ex-situ genebanks (EU H2020 projects AGENT, INCREASING), integrated agrosystems and plant research infrastructure
 
-#### MIAPPE ISA-TAB2BRAPI service
+#### MIAPPE "BrAPI to ISA" service
 
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
-MIAPPE and BrAPI are designed to be inter-compatible. ISA-TAB is a file based implementation of MIAPPE. The ISA-TAB2BRAPI service is a converter between the ISA-TAB files and the BrAPI RESTful endpoints.
+MIAPPE and BrAPI are designed to be inter-compatible. ISA-TAB is a file based implementation of MIAPPE. The "BrAPI to ISA" service is a converter between the ISA-TAB files and the BrAPI RESTful endpoints.
 
 
 ### Data visualization 
@@ -401,6 +401,11 @@ BrAPPs are simple tools developed by the BrAPI community that are entirely relia
 <!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
 DArTView is a desktop application for visualizing genotype variant data and looking for trends or correlations. It is newly BrAPI compatible and can use BrAPI as an input data source.
 
+#### DivBrowse
+
+<!-- Peter S: Stub paragraph to stimulate the writing process. Please edit, rewrite, or delete as needed. -->
+DivBrowse is a BrAPI compatible tool for visualizing genotype variant data. 
+
 
 ### Analytics
 <!-- 

diff --git a/manuscript.pdf b/manuscript.pdf
diff --git a/spelling-error-locations.txt b/spelling-error-locations.txt
@@ -159,10 +159,12 @@ content/03.03.federation-infrastructure.md:18:agrosystems
 content/03.03.federation-infrastructure.md:18:genebanks
 content/03.03.federation-infrastructure.md:18:germplasm
 content/03.03.federation-infrastructure.md:18:situ
+content/03.03.federation-infrastructure.md:20:BrAPI
 content/03.03.federation-infrastructure.md:20:ISA
 content/03.03.federation-infrastructure.md:20:MIAPPE
 content/03.03.federation-infrastructure.md:23:BrAPI
 content/03.03.federation-infrastructure.md:23:BrAPI
+content/03.03.federation-infrastructure.md:23:BrAPI
 content/03.03.federation-infrastructure.md:23:ISA
 content/03.03.federation-infrastructure.md:23:ISA
 content/03.03.federation-infrastructure.md:23:ISA
@@ -189,6 +191,10 @@ content/03.04.visualization.md:31:BrAPI
 content/03.04.visualization.md:31:BrAPI
 content/03.04.visualization.md:31:DArTView
 content/03.04.visualization.md:31:genotype
+content/03.04.visualization.md:33:DivBrowse
+content/03.04.visualization.md:36:BrAPI
+content/03.04.visualization.md:36:DivBrowse
+content/03.04.visualization.md:36:genotype
 content/03.05.analytics.md:1:Analytics
 content/03.05.analytics.md:5:BrAPI
 content/03.05.analytics.md:8:QBMS

diff --git a/spelling-errors.txt b/spelling-errors.txt
@@ -2,7 +2,7 @@ Agrosystem
 agrosystems
 Alic
 alshamaa
-Analytics
+analytics
 APIs
 arial
 backend
@@ -26,6 +26,7 @@ DArTView
 datasets
 DeltaBreed
 digitalization
+DivBrowse
 DOIs
 DSFAS
 ERD
@@ -36,8 +37,8 @@ genebanks
 genotype
 Genotypes
 genotypic
-Genotyping
-germplasm
+genotyping
+Germplasm
 GIGWA
 GLIS
 hackathon
@@ -49,7 +50,7 @@ ICARDA
 ImageBreed
 imbedded
 imilne
-inrae
+INRAE
 interoperable
 IPK
 ISA
@@ -68,13 +69,13 @@ OpenSILEX
 PHENOME
 Phenospex
 phenotypes
-phenotypic
+Phenotypic
 Phenotyping
 PHG
 PHIS’s
 programmatically
 QBMS
-Raubach
+raubach
 Selby
 Shamaa
 situ