Merge pull request #70 from plantbreeding/Isabelle-inrae-patch-3

[ci skip]

This build is based on
32aae21.

This commit was created by the following CI build and job:
https://github.com/plantbreeding/BrAPI-Manuscript2/commit/32aae214871d15a6b71edc71f88539f347bb9dc7/checks
https://github.com/plantbreeding/BrAPI-Manuscript2/actions/runs/9942295278

README.md

@@ -1,7 +1,7 @@
 # Output directory containing the formatted manuscript
 
 The [`gh-pages`](https://github.com/plantbreeding/BrAPI-Manuscript2/tree/gh-pages) branch hosts the contents of this directory at <https://plantbreeding.github.io/BrAPI-Manuscript2/>.
-The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/d2c4738ea9a2829770cfc37148a824d4d81e1d6b/>.
+The permalink for this webpage version is <https://plantbreeding.github.io/BrAPI-Manuscript2/v/32aae214871d15a6b71edc71f88539f347bb9dc7/>.
 To redirect to the permalink for the latest manuscript version at anytime, use the link <https://plantbreeding.github.io/BrAPI-Manuscript2/v/freeze/>.
 
 ## Files
@@ -35,4 +35,4 @@ Verifying timestamps with the `ots verify` command requires running a local bitc
 ## Source
 
 The manuscripts in this directory were built from
-[`d2c4738ea9a2829770cfc37148a824d4d81e1d6b`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/d2c4738ea9a2829770cfc37148a824d4d81e1d6b).
+[`32aae214871d15a6b71edc71f88539f347bb9dc7`](https://github.com/plantbreeding/BrAPI-Manuscript2/commit/32aae214871d15a6b71edc71f88539f347bb9dc7).

index.html

@@ -78,7 +78,7 @@
   <meta name="author" content="Vivian Bass Vega" />
   <meta name="author" content="Stephan Weise" />
   <meta name="author" content="Shawn C. Yarnes" />
-  <meta name="dcterms.date" content="2024-07-10" />
+  <meta name="dcterms.date" content="2024-07-15" />
   <meta name="keywords" content="brapi, breeding, api, standards, community" />
   <title>BrAPI Success Stories</title>
   <style>
@@ -123,11 +123,11 @@
   <meta name="citation_title" content="BrAPI Success Stories" />
   <meta property="og:title" content="BrAPI Success Stories" />
   <meta property="twitter:title" content="BrAPI Success Stories" />
-  <meta name="dc.date" content="2024-07-10" />
-  <meta name="citation_publication_date" content="2024-07-10" />
-  <meta property="article:published_time" content="2024-07-10" />
-  <meta name="dc.modified" content="2024-07-10T20:14:16+00:00" />
-  <meta property="article:modified_time" content="2024-07-10T20:14:16+00:00" />
+  <meta name="dc.date" content="2024-07-15" />
+  <meta name="citation_publication_date" content="2024-07-15" />
+  <meta property="article:published_time" content="2024-07-15" />
+  <meta name="dc.modified" content="2024-07-15T15:34:22+00:00" />
+  <meta property="article:modified_time" content="2024-07-15T15:34:22+00:00" />
   <meta name="dc.language" content="en-US" />
   <meta name="citation_language" content="en-US" />
   <meta name="dc.relation.ispartof" content="Manubot" />
@@ -170,6 +170,7 @@
   <meta name="citation_author_orcid" content="0000-0002-2177-8781" />
   <meta name="citation_author" content="Gabriel Besombes" />
   <meta name="citation_author_institution" content="MISTEA, University of Montpellier, INRAE, Institut Agro, Montpellier, France" />
+  <meta name="citation_author_orcid" content="0009-0004-1359-2145" />
   <meta name="citation_author" content="Alice Boizet" />
   <meta name="citation_author_institution" content="CIRAD, UMR AGAP Institut, Montpellier, France." />
   <meta name="citation_author_institution" content="AGAP Institut, CIRAD, INRAE, Institut Agro, Université de Montpellier, Montpellier, France." />
@@ -356,9 +357,9 @@
   <meta name="citation_fulltext_html_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/" />
   <meta name="citation_pdf_url" content="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
   <link rel="alternate" type="application/pdf" href="https://plantbreeding.github.io/BrAPI-Manuscript2/manuscript.pdf" />
-  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/d2c4738ea9a2829770cfc37148a824d4d81e1d6b/" />
-  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/d2c4738ea9a2829770cfc37148a824d4d81e1d6b/" />
-  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/d2c4738ea9a2829770cfc37148a824d4d81e1d6b/manuscript.pdf" />
+  <link rel="alternate" type="text/html" href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/32aae214871d15a6b71edc71f88539f347bb9dc7/" />
+  <meta name="manubot_html_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/32aae214871d15a6b71edc71f88539f347bb9dc7/" />
+  <meta name="manubot_pdf_url_versioned" content="https://plantbreeding.github.io/BrAPI-Manuscript2/v/32aae214871d15a6b71edc71f88539f347bb9dc7/manuscript.pdf" />
   <meta property="og:type" content="article" />
   <meta property="twitter:card" content="summary_large_image" />
   <link rel="icon" type="image/png" sizes="192x192" href="https://manubot.org/favicon-192x192.png" />
@@ -375,10 +376,10 @@ <h1 class="title">BrAPI Success Stories</h1>
 </header>
 <p><small><em>
 This manuscript
-(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/d2c4738ea9a2829770cfc37148a824d4d81e1d6b/">permalink</a>)
+(<a href="https://plantbreeding.github.io/BrAPI-Manuscript2/v/32aae214871d15a6b71edc71f88539f347bb9dc7/">permalink</a>)
 was automatically generated
-from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/d2c4738ea9a2829770cfc37148a824d4d81e1d6b">plantbreeding/BrAPI-Manuscript2@d2c4738</a>
-on July 10, 2024.
+from <a href="https://github.com/plantbreeding/BrAPI-Manuscript2/tree/32aae214871d15a6b71edc71f88539f347bb9dc7">plantbreeding/BrAPI-Manuscript2@32aae21</a>
+on July 15, 2024.
 </em></small></p>
 <h2 id="authors">Authors</h2>
 <ul>
@@ -478,6 +479,8 @@ <h2 id="authors">Authors</h2>
 </small></p></li>
 <li><p><strong>Gabriel Besombes</strong>
 <br>
+<img src="images/orcid.svg" class="inline_icon" width="16" height="16" alt="ORCID icon" />
+<a href="https://orcid.org/0009-0004-1359-2145">0009-0004-1359-2145</a>
 · <img src="images/github.svg" class="inline_icon" width="16" height="16" alt="GitHub icon" />
 <a href="https://github.com/Gabriel-Besombes">Gabriel-Besombes</a>
 <br>
@@ -1487,7 +1490,7 @@ <h2 class="page_break_before" id="references">References</h2>
 <div class="csl-left-margin">32. </div><div class="csl-right-inline">Bernád, V. <em>et al.</em> <a href="https://doi.org/10.3389/fpls.2024.1268847">Unlocking the genetic diversity and population structure of the newly introduced two-row spring European HerItage Barley collecTion (ExHIBiT)</a>. <em>Front. Plant Sci.</em> <strong>15</strong>, (2024).</div>
 </div>
 <div id="ref-x8DIc6zn" class="csl-entry" role="doc-biblioentry">
-<div class="csl-left-margin">33. </div><div class="csl-right-inline">Elsner-Gearing, F. <em>et al.</em> Admixture and reproductive skew shape the conservation value of ex situ populations of the Critically Endangered eastern black rhino. <em>Conserv Genet</em> (2024) doi:<a href="https://doi.org/10.1007/s10592-024-01611-z">10.1007/s10592-024-01611-z</a>.</div>
+<div class="csl-left-margin">33. </div><div class="csl-right-inline">Elsner-Gearing, F. <em>et al.</em> <a href="https://doi.org/10.1007/s10592-024-01611-z">Admixture and reproductive skew shape the conservation value of ex situ populations of the Critically Endangered eastern black rhino</a>. <em>Conserv Genet</em> <strong>25</strong>, 897–910 (2024).</div>
 </div>
 <div id="ref-m7yuFGsd" class="csl-entry" role="doc-biblioentry">
 <div class="csl-left-margin">34. </div><div class="csl-right-inline">Pommier, C. <em>et al.</em> <a href="https://doi.org/10.34133/2019/1671403">Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS</a>. <em>Plant Phenomics</em> <strong>2019</strong>, (2019).</div>

v/32aae214871d15a6b71edc71f88539f347bb9dc7/images/BrAPI_Application_Chart_2.log

@@ -0,0 +1,11 @@
+%%[ ProductName: Distiller ]%%
+Aptos-Narrow-Bold not found, using Courier.
+%%[ Error: invalidfont; OffendingCommand: yshow ]%%
+
+Stack:
+[90 71 74 71 47 70 45 35 73 74 0]
+(
	)
+
+
+%%[ Flushing: rest of job (to end-of-file) will be ignored ]%%
+%%[ Warning: PostScript error. No PDF file produced. ] %%