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Merge pull request #75 from erlefloch/erlefloch-typo-fix
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erlefloch typo fix
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BrapiCoordinatorSelby authored Aug 13, 2024
2 parents 6e54b99 + 754da41 commit ef50acd
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4 changes: 2 additions & 2 deletions content/03.03.01.AGENT.md
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<!-- Contribution BrAPI 2.0 paper
Suggested Authors: Matthias Lange, Patrick König, Stephan Weise, Gouripriya Davuluri, Suman Kumar, Joseph Ruff, Paul Kersey, Cyril Pommier, Michael Alaux, Erwan Le-Floch -->
Suggested Authors: Matthias Lange, Patrick König, Stephan Weise, Gouripriya Davuluri, Suman Kumar, Joseph Ruff, Paul Kersey, Cyril Pommier, Michael Alaux, Erwan Le Floch -->
#### AGENT

<!-- Matthias Lange -->
Expand All @@ -8,4 +8,4 @@ In the global system for ex situ conservation of PGRs, material is being conserv

The BrAPI specification is one of the agreed standards, that are detailed in the AGENT guidelines for dataflow [@doi:10.5281/zenodo.12625360]. The implemented BrAPI interface enables the analysis of current and historic genotypic and phenotypic information. This will drive the discovery of genes, traits, and knowledge for future missions, complement existing information for wheat and barley, and use the new data standards and infrastructure to promote better access and use of PGR for other crops in European genebanks. The AGENT database backend aggregates curated passport data, phenotypic data, and genotypic data on wheat and barley accessions of 18 project partners. This data is accessible via [BrAPI endpoints](https://github.com/AGENTproject/BrAPI) and explorable in a [web portal](https://agent.ipk-gatersleben.de). Genotyping data uses the DivBrowse [@doi:10.1093/gigascience/giad025] storage engine and its BrAPI interface. Soon, the BrAPI implementation will be expanded to enable the integration of analysis pipelines in the AGENT portal, such as the FIGS+ pipeline developed by ICARDA [@doi:10.22004/AG.ECON.266624]. There is also a plan to integrate the data collected by the AGENT project into the European Search Catalogue for Plant Genetic Resources (EURISCO) [@doi:10.1093/nar/gkac852].
<!-- ![Figure Data flow of genotypic data from AGENT partner databases](images/AGENT_Genotyping_Data_Flow.png){#fig:AGENT_Genotyping_Data_Flow width="100%"} -->
<!-- ![Figure AGENT Portal](images/AGENT_Web_Frontend.png){#fig:AGENT_Web_Frontend width="100%"} -->
<!-- ![Figure AGENT Portal](images/AGENT_Web_Frontend.png){#fig:AGENT_Web_Frontend width="100%"} -->
2 changes: 1 addition & 1 deletion content/90.back-matter.md
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Expand Up @@ -72,7 +72,7 @@ The authors would like to acknowledge the following funding sources:
+ **Matthias Lange**: Matthias wrote the section on the AGENT project, and has made significant contributions to the BrAPI compatibility of the AGENT project.
+ **Marie-Angélique Laporte**: Marie-Angélique wrote the section on the ClimMob project, and has made significant contributions to the BrAPI compatibility of the ClimMob project.
+ **Taein Lee**: Taein has made significant contributions to the BIMS project.
+ **Erwan Le-Floch**: Erwan has made significant contributions to the AGENT project.
+ **Erwan Le Floch**: Erwan has made significant contributions to the AGENT project.
+ **Francisco López**: Francisco has made significant contributions to the GLIS project.
+ **Brandon Madriz**: Brandon wrote the section on the ClimMob project, and has made significant contributions to the BrAPI compatibility of the ClimMob project.
+ **Dorrie Main**: Dorrie has made significant contributions to the BIMS project.
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2 changes: 1 addition & 1 deletion content/metadata.yaml
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Expand Up @@ -361,7 +361,7 @@ authors:
corresponding: false
affiliations:
- Department of Horticulture, Washington State University
- name: Erwan Le-Floch
- name: Erwan Le Floch
initials: ELF
github: erlefloch
orcid: 0000-0002-1010-6859
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2 changes: 1 addition & 1 deletion content/supplemental_docs/BrAPI_Community.yaml
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Expand Up @@ -217,7 +217,7 @@ community:
orcid: 0000-0002-2000-2586
affiliations:
- Department of Horticulture, Washington State University
- name: Erwan Le-Floch
- name: Erwan Le Floch
email: [email protected]
initials: ELF
github: erlefloch
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