Minor updates to the release guide #460
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test adaptivity | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - develop | |
| pull_request: | |
| branches: | |
| - "*" | |
| jobs: | |
| integration_test: | |
| name: Run integration test | |
| runs-on: ubuntu-latest | |
| container: precice/precice | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: | |
| path: micro-manager | |
| - name: Install dependencies | |
| working-directory: micro-manager | |
| run: | | |
| apt-get -qq update | |
| apt-get -qq install python3-dev python3-pip git python-is-python3 pkg-config | |
| python -m pip install --upgrade pip | |
| pip install setuptools wheel | |
| - name: Install Micro Manager | |
| working-directory: micro-manager | |
| run: pip3 install --user . | |
| - name: Run integration test with local adaptivity | |
| timeout-minutes: 3 | |
| working-directory: micro-manager/tests/integration/test_unit_cube | |
| run: python3 unit_cube.py & python3 run_micro_manager.py --config micro-manager-config-local-adaptivity.json | |
| - name: Run integration test serially with global adaptivity | |
| timeout-minutes: 3 | |
| working-directory: micro-manager/tests/integration/test_unit_cube | |
| run: python3 unit_cube.py & python3 run_micro_manager.py --config micro-manager-config-global-adaptivity.json | |
| unit_tests_serial: | |
| name: Run unit tests (serial variants) | |
| runs-on: ubuntu-latest | |
| container: precice/precice | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v3 | |
| with: | |
| path: micro-manager | |
| - name: Install Dependencies | |
| working-directory: micro-manager | |
| run: | | |
| apt-get -qq update | |
| apt-get -qq install python3-dev python3-pip git python-is-python3 pkg-config | |
| python -m pip install --upgrade pip | |
| pip install setuptools wheel | |
| - name: Install Micro Manager | |
| working-directory: micro-manager | |
| run: pip3 install --user . | |
| - name: Run unit tests | |
| working-directory: micro-manager/tests/unit | |
| run: python3 -m unittest test_adaptivity_serial.py | |
| unit_tests_parallel: | |
| name: Run unit tests (parallel variants) | |
| runs-on: ubuntu-latest | |
| container: precice/precice | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v3 | |
| with: | |
| path: micro-manager | |
| - name: Install sudo for MPI | |
| working-directory: micro-manager | |
| run: | | |
| apt-get -qq update | |
| apt-get -qq install sudo | |
| - name: Use mpi4py | |
| uses: mpi4py/setup-mpi@v1 | |
| - name: Add user precice | |
| run: useradd -m -s /bin/bash precice | |
| - name: Install Dependencies | |
| working-directory: micro-manager | |
| run: | | |
| apt-get -qq update | |
| apt-get -qq install python3-dev python3-pip git python-is-python3 pkg-config | |
| su -c "python -m pip install --upgrade pip" precice | |
| su -c "pip install setuptools wheel twine" precice | |
| - name: Install Micro Manager | |
| working-directory: micro-manager | |
| run: su -c "pip3 install --user ." precice | |
| - name: Run unit tests | |
| working-directory: micro-manager/tests/unit | |
| run: su -c "mpiexec -n 2 python3 -m unittest test_adaptivity_parallel.py" precice |