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@@ -9,3 +9,4 @@ | |
| ^README\.Rmd$ | ||
| ^\.travis\.yml$ | ||
| ^codecov\.yml$ | ||
| ^\.github$ | ||
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| *.html |
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| # | ||
| # NOTE: This workflow is overkill for most R packages and | ||
| # check-standard.yaml is likely a better choice. | ||
| # usethis::use_github_action("check-standard") will install it. | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
|
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| name: R-CMD-check | ||
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| jobs: | ||
| R-CMD-check: | ||
| runs-on: ${{ matrix.config.os }} | ||
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| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| config: | ||
| - {os: macos-latest, r: 'release'} | ||
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| - {os: windows-latest, r: 'release'} | ||
| # Use 3.6 to trigger usage of RTools35 | ||
| - {os: windows-latest, r: '3.6'} | ||
| # use 4.1 to check with rtools40's older compiler | ||
| - {os: windows-latest, r: '4.1'} | ||
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| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
| - {os: ubuntu-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'oldrel-1'} | ||
| - {os: ubuntu-latest, r: 'oldrel-2'} | ||
| - {os: ubuntu-latest, r: 'oldrel-3'} | ||
| - {os: ubuntu-latest, r: 'oldrel-4'} | ||
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| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| R_KEEP_PKG_SOURCE: yes | ||
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| steps: | ||
| - uses: actions/checkout@v3 | ||
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| - uses: r-lib/actions/setup-pandoc@v2 | ||
|
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
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| - uses: r-lib/actions/check-r-package@v2 | ||
| with: | ||
| upload-snapshots: true |
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| @@ -0,0 +1,48 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
| release: | ||
| types: [published] | ||
| workflow_dispatch: | ||
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| name: pkgdown | ||
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| jobs: | ||
| pkgdown: | ||
| runs-on: ubuntu-latest | ||
| # Only restrict concurrency for non-PR jobs | ||
| concurrency: | ||
| group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| permissions: | ||
| contents: write | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
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| - uses: r-lib/actions/setup-pandoc@v2 | ||
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::pkgdown, local::. | ||
| needs: website | ||
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| - name: Build site | ||
| run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE) | ||
| shell: Rscript {0} | ||
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| - name: Deploy to GitHub pages 🚀 | ||
| if: github.event_name != 'pull_request' | ||
| uses: JamesIves/[email protected] | ||
| with: | ||
| clean: false | ||
| branch: gh-pages | ||
| folder: docs |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,79 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| issue_comment: | ||
| types: [created] | ||
|
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| name: Commands | ||
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| jobs: | ||
| document: | ||
| if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/document') }} | ||
| name: document | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
|
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| - uses: r-lib/actions/pr-fetch@v2 | ||
| with: | ||
| repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
|
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||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::roxygen2 | ||
| needs: pr-document | ||
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| - name: Document | ||
| run: roxygen2::roxygenise() | ||
| shell: Rscript {0} | ||
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| - name: commit | ||
| run: | | ||
| git config --local user.name "$GITHUB_ACTOR" | ||
| git config --local user.email "[email protected]" | ||
| git add man/\* NAMESPACE | ||
| git commit -m 'Document' | ||
| - uses: r-lib/actions/pr-push@v2 | ||
| with: | ||
| repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
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| style: | ||
| if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/style') }} | ||
| name: style | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
|
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||
| - uses: r-lib/actions/pr-fetch@v2 | ||
| with: | ||
| repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
|
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| - uses: r-lib/actions/setup-r@v2 | ||
|
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| - name: Install dependencies | ||
| run: install.packages("styler") | ||
| shell: Rscript {0} | ||
|
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| - name: Style | ||
| run: styler::style_pkg() | ||
| shell: Rscript {0} | ||
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| - name: commit | ||
| run: | | ||
| git config --local user.name "$GITHUB_ACTOR" | ||
| git config --local user.email "[email protected]" | ||
| git add \*.R | ||
| git commit -m 'Style' | ||
| - uses: r-lib/actions/pr-push@v2 | ||
| with: | ||
| repo-token: ${{ secrets.GITHUB_TOKEN }} |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,50 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
|
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| name: test-coverage | ||
|
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| jobs: | ||
| test-coverage: | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
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| steps: | ||
| - uses: actions/checkout@v3 | ||
|
|
||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::covr | ||
| needs: coverage | ||
|
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| - name: Test coverage | ||
| run: | | ||
| covr::codecov( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | ||
| ) | ||
| shell: Rscript {0} | ||
|
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| - name: Show testthat output | ||
| if: always() | ||
| run: | | ||
| ## -------------------------------------------------------------------- | ||
| find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
|
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| - name: Upload test results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v3 | ||
| with: | ||
| name: coverage-test-failures | ||
| path: ${{ runner.temp }}/package |
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