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properties: upgrade HBaseVertex to support multi-properties
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The HBase graph tinkerpop implementation specifies Cardinality.single as
the default.  Since HBase does not (at the time of this writing) support
multiple values, this feature wraps the multi-values in a list and
writes the list to HBase.  As a consequence of this list wrapper,
indexed properties can still only support-single value properties.

When reading/writing from HBase, most properties will be written as
single objects.  Only when a property is specifically added with
non-single cardinality will it be written to HBase as a list.

In order to avoid java native serialization, the serialization of
non-single property values uses Kryo (with a small lightweight wrapper
class to accomplish this).
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Michael Rappazzo committed Mar 13, 2019
1 parent 29b0ea4 commit 8b00107
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Showing 15 changed files with 564 additions and 172 deletions.
19 changes: 14 additions & 5 deletions src/main/java/io/hgraphdb/HBaseBulkLoader.java
Original file line number Diff line number Diff line change
@@ -1,6 +1,14 @@
package io.hgraphdb;

import io.hgraphdb.mutators.*;
import io.hgraphdb.mutators.Creator;
import io.hgraphdb.mutators.EdgeIndexRemover;
import io.hgraphdb.mutators.EdgeIndexWriter;
import io.hgraphdb.mutators.EdgeWriter;
import io.hgraphdb.mutators.PropertyWriter;
import io.hgraphdb.mutators.VertexIndexRemover;
import io.hgraphdb.mutators.VertexIndexWriter;
import io.hgraphdb.mutators.VertexWriter;

import org.apache.hadoop.hbase.TableName;
import org.apache.hadoop.hbase.client.BufferedMutator;
import org.apache.hadoop.hbase.client.BufferedMutatorParams;
Expand Down Expand Up @@ -84,7 +92,7 @@ public Vertex addVertex(final Object... keyValues) {
idValue = HBaseGraphUtils.generateIdIfNeeded(idValue);
long now = System.currentTimeMillis();
HBaseVertex vertex = new HBaseVertex(graph, idValue, label, now, now,
HBaseGraphUtils.propertiesToMap(keyValues));
HBaseGraphUtils.propertiesToMultimap(keyValues));
vertex.validate();

Iterator<IndexMetadata> indices = vertex.getIndices(OperationType.WRITE);
Expand Down Expand Up @@ -192,14 +200,14 @@ public void setProperty(Vertex vertex, String key, Object value) {
boolean hasIndex = v.hasIndex(OperationType.WRITE, key);
if (hasIndex) {
// only load old value if using index
oldValue = v.getProperty(key);
oldValue = v.getSingleProperty(key).orElse(null);
if (oldValue != null && !oldValue.equals(value)) {
VertexIndexRemover indexRemover = new VertexIndexRemover(graph, v, key, null);
if (vertexIndicesMutator != null) vertexIndicesMutator.mutate(getMutationList(indexRemover.constructMutations()));
}
}

v.getProperties().put(key, value);
v.cacheProperty(key, value);
v.updatedAt(System.currentTimeMillis());

if (hasIndex) {
Expand All @@ -220,7 +228,8 @@ private List<? extends Mutation> getMutationList(Iterator<? extends Mutation> mu
m -> m.setDurability(skipWAL ? Durability.SKIP_WAL : Durability.USE_DEFAULT)));
}

public void close() {
@Override
public void close() {
try {
if (edgesMutator != null) edgesMutator.close();
if (edgeIndicesMutator != null) edgeIndicesMutator.close();
Expand Down
124 changes: 122 additions & 2 deletions src/main/java/io/hgraphdb/HBaseEdge.java
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,9 @@

import io.hgraphdb.models.EdgeIndexModel;
import io.hgraphdb.models.EdgeModel;
import io.hgraphdb.mutators.Mutator;
import io.hgraphdb.mutators.Mutators;

import org.apache.tinkerpop.gremlin.structure.Direction;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Property;
Expand All @@ -12,15 +15,22 @@
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import java.util.Collections;
import java.util.Iterator;
import java.util.Map;
import java.util.Set;
import java.util.Map.Entry;
import java.util.concurrent.ConcurrentHashMap;
import java.util.stream.Stream;

public class HBaseEdge extends HBaseElement implements Edge {

private static final Logger LOGGER = LoggerFactory.getLogger(HBaseEdge.class);

private Vertex inVertex;
private Vertex outVertex;
protected Map<String, Object> properties;
protected transient boolean propertiesFullyLoaded;

public HBaseEdge(HBaseGraph graph, Object id) {
this(graph, id, null, null, null, null, null, null);
Expand All @@ -37,10 +47,12 @@ public HBaseEdge(HBaseGraph graph, Object id, String label, Long createdAt, Long

public HBaseEdge(HBaseGraph graph, Object id, String label, Long createdAt, Long updatedAt, Map<String, Object> properties,
boolean propertiesFullyLoaded, Vertex inVertex, Vertex outVertex) {
super(graph, id, label, createdAt, updatedAt, properties, propertiesFullyLoaded);
super(graph, id, label, createdAt, updatedAt);

this.inVertex = inVertex;
this.outVertex = outVertex;
this.properties = properties;
this.propertiesFullyLoaded = propertiesFullyLoaded;
}

@Override
Expand All @@ -55,13 +67,26 @@ public ElementType getElementType() {
return ElementType.EDGE;
}

public Map<String, Object> getProperties() {
if (properties == null || !propertiesFullyLoaded) {
load();
propertiesFullyLoaded = true;
}
return properties;
}

@Override
public void copyFrom(HBaseElement element) {
super.copyFrom(element);
if (element instanceof HBaseEdge) {
HBaseEdge copy = (HBaseEdge) element;
if (copy.inVertex != null) this.inVertex = copy.inVertex;
if (copy.outVertex != null) this.outVertex = copy.outVertex;
if (copy.properties != null
&& (copy.propertiesFullyLoaded || this.properties == null)) {
this.properties = new ConcurrentHashMap<>(copy.properties);
this.propertiesFullyLoaded = copy.propertiesFullyLoaded;
}
}
}

Expand Down Expand Up @@ -100,6 +125,101 @@ public Vertex getVertex(Direction direction) throws IllegalArgumentException {
return Direction.IN.equals(direction) ? inVertex : outVertex;
}

public void setProperty(String key, Object value) {
ElementHelper.validateProperty(key, value);

graph.validateProperty(getElementType(), label, key, value);

// delete from index model before setting property
Object oldValue = null;
boolean hasIndex = hasIndex(OperationType.WRITE, key);
if (hasIndex) {
// only load old value if using index
oldValue = getProperty(key);
if (oldValue != null && !oldValue.equals(value)) {
deleteFromIndexModel(key, null);
}
}

getProperties().put(key, value);
updatedAt(System.currentTimeMillis());

if (hasIndex) {
if (oldValue == null || !oldValue.equals(value)) {
writeToIndexModel(key);
}
}
Mutator writer = getModel().writeProperty(this, key, value);
Mutators.write(getTable(), writer);
}

public void incrementProperty(String key, long value) {
if (!graph.configuration().getUseSchema()) {
throw new HBaseGraphNoSchemaException("Schema not enabled");
}
ElementHelper.validateProperty(key, value);

graph.validateProperty(getElementType(), label, key, value);

updatedAt(System.currentTimeMillis());

Mutator writer = getModel().incrementProperty(this, key, value);
long newValue = Mutators.increment(getTable(), writer, key);
getProperties().put(key, newValue);
}

@Override
public Set<String> keys() {
return Collections.unmodifiableSet(properties.keySet());
}

public void removeProperty(String key) {
Object value = getProperty(key);
if (value != null) {
// delete from index model before removing property
boolean hasIndex = hasIndex(OperationType.WRITE, key);
if (hasIndex) {
deleteFromIndexModel(key, null);
}

getProperties().remove(key);
updatedAt(System.currentTimeMillis());

Mutator writer = getModel().clearProperty(this, key);
Mutators.write(getTable(), writer);
}
}

@Override
public Stream<Entry<String, Object>> propertyEntriesStream() {
return properties.entrySet().stream();
}

@Override
public int propertySize() {
return this.properties.size();
}

@SuppressWarnings("unchecked")
public <V> V getProperty(String key) {
if (properties != null) {
// optimization for partially loaded properties
V val = (V) properties.get(key);
if (val != null) return val;
}
return (V) getProperties().get(key);
}

@Override
public boolean hasProperty(String key) {
if (properties != null) {
// optimization for partially loaded properties
Object val = properties.get(key);
if (val != null) return true;
}
return keys().contains(key);
}

@Override
public void remove() {
// Get rid of the endpoints and edge themselves.
Expand All @@ -115,7 +235,7 @@ public void remove() {

@Override
public <V> Iterator<Property<V>> properties(final String... propertyKeys) {
Iterable<String> keys = getPropertyKeys();
Iterable<String> keys = keys();
Iterator<String> filter = IteratorUtils.filter(keys.iterator(),
key -> ElementHelper.keyExists(key, propertyKeys));
return IteratorUtils.map(filter,
Expand Down
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