vcf parsing bugfix

rbutleriii · Feb 21, 2019 · a3ad494 · a3ad494
1 parent cd0b8ab
commit a3ad494
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diff --git a/clinotator/global_vars.py b/clinotator/global_vars.py
@@ -10,7 +10,7 @@
 See main, eventually tests will be added for this module
 '''
 
-__version__ = "1.2.1"
+__version__ = "1.2.2"
 
 
 ### getncbi.py global variables 

diff --git a/clinotator/vcf.py b/clinotator/vcf.py
@@ -31,7 +31,7 @@ def parse_header(file_object, outprefix):
             info_list = []
             for index, line in enumerate(
                     next(file_object) for x in range(g.max_vcf_header_size)):
-                m = re.match('##([\w-]+)=', line)
+                m = re.match('##([\w\-\.]+)=', line)
 
                 if m and m.group(1) == 'INFO':
                     header.append(line)