Official implementation for "Self-calibrated 3D differential phase contrast microscopy with optimized illumination"

Dependency

• tensorflow (2.2.0 tested)
• numpy < 2.0
• jupyterlab, matplotlib (for visualization)

Run

Follow the self_z_calibration.ipynb notebook to run step-by-step.

Paper

@article{cao2022self,
  title={Self-calibrated 3D differential phase contrast microscopy with optimized illumination},
  author={Cao, Ruiming and Kellman, Michael and Ren, David and Eckert, Regina and Waller, Laura},
  journal={Biomedical Optics Express},
  volume={13},
  number={3},
  pages={1671--1684},
  year={2022},
  publisher={Optica Publishing Group}
}