fix #804: use xfun::file_rename() because file.rename() would fail to… #635
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Package amsmath Warning: Foreign command \atopwithdelims;
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(amsmath) \frac or \genfrac should be used instead
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(amsmath) on input line 766.
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LaTeX Warning: Reference `fig:does-not-exist' on page 38 undefined on input line 1507.
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LaTeX Warning: There were undefined references.
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