Spooky cleaning 🎃 2023 (#61)

* Spooky cleaning 🎃 2023 * Update TensorFlow
rstudio · Oct 31, 2023 · 29fd3ff · 29fd3ff
1 parent 42549d6
commit 29fd3ff
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Showing 5 changed files with 40 additions and 24 deletions.
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -56,18 +56,15 @@ jobs:
         shell: Rscript {0}
 
       - name: Install Miniconda
-        run: |
-          reticulate::install_miniconda()
+        # conda can fail at downgrading python, so we specify python version in advance
+        env:
+          RETICULATE_MINICONDA_PYTHON_VERSION: "3.7"
+        run: reticulate::install_miniconda() # creates r-reticulate conda env by default
         shell: Rscript {0}
 
-      - name: Find Miniconda on macOS
-        if: runner.os == 'macOS'
-        run: echo "options(reticulate.conda_binary = reticulate:::miniconda_conda())" >> .Rprofile
-
       - name: Install TensorFlow
         run: |
-          reticulate::conda_create('r-reticulate', packages = c('python==3.6.9'))
-          tensorflow::install_tensorflow(version='2.4.0')
+          tensorflow::install_tensorflow(version='2.7', conda_python_version = NULL)
         shell: Rscript {0}
 
       - uses: r-lib/actions/check-r-package@v2

diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -19,6 +19,8 @@ jobs:
       group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
     steps:
       - uses: actions/checkout@v3
 
@@ -38,14 +40,15 @@ jobs:
         shell: Rscript {0}
 
       - name: Install Miniconda
-        run: |
-          reticulate::install_miniconda()
+        # conda can fail at downgrading python, so we specify python version in advance
+        env:
+          RETICULATE_MINICONDA_PYTHON_VERSION: "3.7"
+        run: reticulate::install_miniconda() # creates r-reticulate conda env by default
         shell: Rscript {0}
 
       - name: Install TensorFlow
         run: |
-          reticulate::conda_create('r-reticulate', packages = c('python==3.6.9'))
-          tensorflow::install_tensorflow(version='2.4.0')
+          tensorflow::install_tensorflow(version='2.7', conda_python_version = NULL)
         shell: Rscript {0}
 
       - name: Build site
@@ -54,7 +57,7 @@ jobs:
 
       - name: Deploy to GitHub pages 🚀
         if: github.event_name != 'pull_request'
-        uses: JamesIves/[email protected].4
+        uses: JamesIves/github-pages-deploy-action@v4.4.1
         with:
           clean: false
           branch: gh-pages

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
@@ -31,20 +31,36 @@ jobs:
         shell: Rscript {0}
 
       - name: Install Miniconda
-        run: |
-          reticulate::install_miniconda()
+        # conda can fail at downgrading python, so we specify python version in advance
+        env:
+          RETICULATE_MINICONDA_PYTHON_VERSION: "3.7"
+        run: reticulate::install_miniconda() # creates r-reticulate conda env by default
         shell: Rscript {0}
 
-      - name: Find Miniconda on macOS
-        if: runner.os == 'macOS'
-        run: echo "options(reticulate.conda_binary = reticulate:::miniconda_conda())" >> .Rprofile
-
       - name: Install TensorFlow
         run: |
-          reticulate::conda_create('r-reticulate', packages = c('python==3.6.9'))
-          tensorflow::install_tensorflow(version='2.4.0')
+          tensorflow::install_tensorflow(version='2.7', conda_python_version = NULL)
         shell: Rscript {0}
 
       - name: Test coverage
-        run: covr::codecov(quiet = FALSE)
+        run: |
+          covr::codecov(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
         shell: Rscript {0}
+
+      - name: Show testthat output
+        if: always()
+        run: |
+          ## --------------------------------------------------------------------
+          find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
+        shell: bash
+
+      - name: Upload test results
+        if: failure()
+        uses: actions/upload-artifact@v3
+        with:
+          name: coverage-test-failures
+          path: ${{ runner.temp }}/package
diff --git a/LICENSE b/LICENSE
@@ -1,2 +1,2 @@
-YEAR: 2022
+YEAR: 2023
 COPYRIGHT HOLDER: bundle authors
diff --git a/LICENSE.md b/LICENSE.md
@@ -1,6 +1,6 @@
 # MIT License
 
-Copyright (c) 2022 bundle authors
+Copyright (c) 2023 bundle authors
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal