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For a lot of users it might be handy to just use a link to a dataset on huggingface, instead of manually providing the sequence and label fasta files.
The configuration could look like this for example:
sequence_file: null hf_dataset: path: proteinea/fluorescence name: null # Optional name can specify a dataset configuration sequence_column: primary target_column: log_fluorescence protocol: sequence_to_class embeddings_file: per_protein_embeddings.h5 model_choice: FNN optimizer_choice: adam learning_rate: 0.001 dropout_rate: 0.25 loss_choice: cross_entropy_loss
Further resources:
The text was updated successfully, but these errors were encountered:
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For a lot of users it might be handy to just use a link to a dataset on huggingface, instead of manually providing the sequence and label fasta files.
The configuration could look like this for example:
Further resources:
The text was updated successfully, but these errors were encountered: