Skip to content

added unit_test dataset #8

added unit_test dataset

added unit_test dataset #8

Workflow file for this run

name: build
on:
push:
branches: [ dev ]
jobs:
build-linux:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Install dependencies
run: |
sudo apt-get update
sudo apt-get install -y libcurl4-openssl-dev
python -m pip install --upgrade pip
sudo apt-get install -y r-base
sudo apt-get install graphviz libgraphviz-dev pkg-config
pip install pytest-cov flake8 decoupler omnipath requests rpy2 pathos pyocclient
pip install git+https://github.com/saezlab/corneto.git@dev networkx pygraphviz picos .
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test and add coverage
run: |
pytest --cov --disable-warnings networkcommons