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updated test with new deseq2 values #24

updated test with new deseq2 values

updated test with new deseq2 values #24

Workflow file for this run

name: build
on:
push:
branches: [ dev ]
jobs:
build-linux:
defaults:
run:
shell: bash -l {0}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: networkcommons
environment-file: environment.yml
- name: Install additional dependencies
run: |
pip install git+https://github.com/saezlab/corneto.git@dev .
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test and add coverage
run: |
pytest --cov --disable-warnings networkcommons