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fix qc vignette
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samuel-marsh committed Nov 15, 2023
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4 changes: 2 additions & 2 deletions vignettes/articles/QC_Plots.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,7 @@ hca_bm <- UpdateSeuratObject(hca_bm)
accepted_names <- Add_Mito_Ribo_Seurat(list_species_names = TRUE)
```

## Adding
# Adding QC Metrics

## Add Mitochondrial and Ribosomal Gene Percentages
scCustomize contains easy wrapper function to automatically add both Mitochondrial and Ribosomal count percentages to meta.data slot. If you are using mouse, human, rat, zebrafish, drosophila, marmoset, or macaque data all you need to do is specify the `species` parameter.
Expand Down Expand Up @@ -163,7 +163,7 @@ hca_bm <- Add_Cell_QC_Metrics(seurat_object = hca_bm, species = "human", add_mit



## Plotting QC Metrics
# Plotting QC Metrics
scCustomize has a number of quick QC plotting options for ease of use.
*NOTE: Most scCustomize plotting functions contain `...` parameter to allow user to supply any of the parameters for the original Seurat function that is being used under the hood.*

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