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The error messages about install asPollinator_v6.1 for phasing #1

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GeorgeBGM opened this issue Jul 28, 2020 · 1 comment
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@GeorgeBGM
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To those who may concern:
Hi, I'm trying to recover the assembly result using GameteBinning assembly method in your analysis pipeline(https://doi.org/10.1101/2020.04.24.060046).But I got error messages when I used this
Installation Notes(https://github.com/schneebergerlab/GameteBinning/blob/master/INSTALL).
The error messages as follow:
##########################################################
make
##########################################################
g++ asPollinator_1.0.cpp split_string.cpp -O3 -o asPollinator_1.0
asPollinator_1.0.cpp: In function ‘int main(int, char**)’:
asPollinator_1.0.cpp:220:14: error: ‘ENOENT’ was not declared in this scope
else if (ENOENT == errno)
^
asPollinator_1.0.cpp:220:24: error: ‘errno’ was not declared in this scope
else if (ENOENT == errno)
^
asPollinator_1.0.cpp:238:14: error: ‘ENOENT’ was not declared in this scope
else if (ENOENT == errno)
^
asPollinator_1.0.cpp:238:24: error: ‘errno’ was not declared in this scope
else if (ENOENT == errno)
^
asPollinator_1.0.cpp:257:14: error: ‘ENOENT’ was not declared in this scope
else if (ENOENT == errno)
^
asPollinator_1.0.cpp:257:24: error: ‘errno’ was not declared in this scope
else if (ENOENT == errno)
^
make: *** [makefile:2: debug_noisy] Error 1

     Is there need several others operations?Sorry for that I know litter about C++,can you give me several advises?

I am looking forward for your reply.
Best,
Du

@HeQSun
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HeQSun commented Jul 28, 2020

Hi Du,

there might be a compiler issue. But I have updated the code. Could you git clone and recompile again?

Let me know if the problem still still exists.

Best,
Hequan

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