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Generate Pelican site [ci skip]
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2 changes: 1 addition & 1 deletion .buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: b85de9159e1069c2b1e9d4ba4576d903
config: 033e29e79c62ba83c8d8266749f5e836
tags: 645f666f9bcd5a90fca523b33c5a78b7
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2 changes: 1 addition & 1 deletion _sources/auto_examples/index.rst.txt
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Expand Up @@ -87,7 +87,7 @@ Examples Gallery

.. raw:: html

<div class="sphx-glr-thumbcontainer" tooltip="This example demonstrates how to use a weighted lasso with some vanishing weights. The fast sol...">
<div class="sphx-glr-thumbcontainer" tooltip="This example demonstrates how to use a weighted lasso with some vanishing weights. The fast solver is adapted to use primal Anderson acceleration, allowing it to not compute the dual and handle 0 weights.">

.. only:: html

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8 changes: 6 additions & 2 deletions _sources/auto_examples/plot_compare_time.rst.txt
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Expand Up @@ -37,7 +37,7 @@ Compare time to solve large scale Lasso problems with scikit-learn.

.. code-block:: none
file_sizes: 0%| | 0.00/26.8M [00:00<?, ?B/s] file_sizes: 0%| | 24.6k/26.8M [00:00<03:34, 125kB/s] file_sizes: 0%| | 49.2k/26.8M [00:00<03:35, 124kB/s] file_sizes: 0%| | 106k/26.8M [00:00<02:13, 200kB/s] file_sizes: 1%|▏ | 221k/26.8M [00:00<01:16, 349kB/s] file_sizes: 2%|▍ | 451k/26.8M [00:00<00:41, 640kB/s] file_sizes: 3%|▉ | 909k/26.8M [00:01<00:21, 1.21MB/s] file_sizes: 7%|█▊ | 1.83M/26.8M [00:01<00:10, 2.32MB/s] file_sizes: 14%|███▌ | 3.66M/26.8M [00:01<00:05, 4.51MB/s] file_sizes: 20%|█████ | 5.23M/26.8M [00:01<00:03, 5.57MB/s] file_sizes: 25%|██████▌ | 6.81M/26.8M [00:01<00:03, 6.31MB/s] file_sizes: 35%|█████████▏ | 9.43M/26.8M [00:02<00:02, 8.31MB/s] file_sizes: 41%|██████████▋ | 11.0M/26.8M [00:02<00:01, 8.22MB/s] file_sizes: 47%|████████████▏ | 12.6M/26.8M [00:02<00:01, 8.16MB/s] file_sizes: 53%|█████████████▋ | 14.1M/26.8M [00:02<00:01, 8.13MB/s] file_sizes: 63%|████████████████▎ | 16.8M/26.8M [00:02<00:01, 9.60MB/s] file_sizes: 72%|██████████████████▊ | 19.4M/26.8M [00:03<00:00, 10.6MB/s] file_sizes: 78%|████████████████████▎ | 21.0M/26.8M [00:03<00:00, 9.90MB/s] file_sizes: 88%|██████████████████████▉ | 23.6M/26.8M [00:03<00:00, 10.9MB/s] file_sizes: 98%|█████████████████████████▍| 26.2M/26.8M [00:03<00:00, 11.5MB/s] file_sizes: 100%|██████████████████████████| 26.8M/26.8M [00:03<00:00, 7.08MB/s]
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Expand Down Expand Up @@ -138,7 +138,7 @@ Compare time to solve large scale Lasso problems with scikit-learn.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 47.620 seconds)
**Total running time of the script:** (0 minutes 46.603 seconds)


.. _sphx_glr_download_auto_examples_plot_compare_time.py:
Expand All @@ -155,6 +155,10 @@ Compare time to solve large scale Lasso problems with scikit-learn.

:download:`Download Python source code: plot_compare_time.py <plot_compare_time.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_compare_time.zip <plot_compare_time.zip>`


.. only:: html

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Expand Up @@ -158,7 +158,7 @@ Fit check that groups are either all 0 or all non zero
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 15.201 seconds)
**Total running time of the script:** (0 minutes 14.201 seconds)


.. _sphx_glr_download_auto_examples_plot_group_logistic_regression.py:
Expand All @@ -175,6 +175,10 @@ Fit check that groups are either all 0 or all non zero

:download:`Download Python source code: plot_group_logistic_regression.py <plot_group_logistic_regression.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_group_logistic_regression.zip <plot_group_logistic_regression.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_lasso_vs_weighted.rst.txt
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Expand Up @@ -84,7 +84,7 @@ Illustrate the importance of feature normalization when penalizing.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 3.903 seconds)
**Total running time of the script:** (0 minutes 3.872 seconds)


.. _sphx_glr_download_auto_examples_plot_lasso_vs_weighted.py:
Expand All @@ -101,6 +101,10 @@ Illustrate the importance of feature normalization when penalizing.

:download:`Download Python source code: plot_lasso_vs_weighted.py <plot_lasso_vs_weighted.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_lasso_vs_weighted.zip <plot_lasso_vs_weighted.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_logreg_various_penalties.rst.txt
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Expand Up @@ -112,7 +112,7 @@ Illustrate the modularity of ``skglm`` by using ``GeneralizedLinearEstimator`` w
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 8.967 seconds)
**Total running time of the script:** (0 minutes 8.618 seconds)


.. _sphx_glr_download_auto_examples_plot_logreg_various_penalties.py:
Expand All @@ -129,6 +129,10 @@ Illustrate the modularity of ``skglm`` by using ``GeneralizedLinearEstimator`` w

:download:`Download Python source code: plot_logreg_various_penalties.py <plot_logreg_various_penalties.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_logreg_various_penalties.zip <plot_logreg_various_penalties.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_pen_prox.rst.txt
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Expand Up @@ -77,7 +77,7 @@ Illustrate the value and proximal operators of some sparse penalties.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.487 seconds)
**Total running time of the script:** (0 minutes 2.161 seconds)


.. _sphx_glr_download_auto_examples_plot_pen_prox.py:
Expand All @@ -94,6 +94,10 @@ Illustrate the value and proximal operators of some sparse penalties.

:download:`Download Python source code: plot_pen_prox.py <plot_pen_prox.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_pen_prox.zip <plot_pen_prox.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_reweighted_l1.rst.txt
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Expand Up @@ -131,7 +131,7 @@ direct proximal computation and iterative reweighting.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 5.326 seconds)
**Total running time of the script:** (0 minutes 5.002 seconds)


.. _sphx_glr_download_auto_examples_plot_reweighted_l1.py:
Expand All @@ -148,6 +148,10 @@ direct proximal computation and iterative reweighting.

:download:`Download Python source code: plot_reweighted_l1.py <plot_reweighted_l1.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_reweighted_l1.zip <plot_reweighted_l1.zip>`


.. only:: html

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8 changes: 6 additions & 2 deletions _sources/auto_examples/plot_sparse_group_lasso.rst.txt
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Expand Up @@ -173,14 +173,14 @@ some values are 0 too
.. code-block:: none
([<matplotlib.axis.YTick object at 0x7fef611c0cd0>, <matplotlib.axis.YTick object at 0x7fef60f50df0>, <matplotlib.axis.YTick object at 0x7fef6867a6d0>], [Text(0, 0, '0'), Text(0, 1, '1'), Text(0, 2, '2')])
([<matplotlib.axis.YTick object at 0x7fcd4055fc10>, <matplotlib.axis.YTick object at 0x7fcd4835ff10>, <matplotlib.axis.YTick object at 0x7fcd4833bd60>], [Text(0, 0, '0'), Text(0, 1, '1'), Text(0, 2, '2')])
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 5.796 seconds)
**Total running time of the script:** (0 minutes 5.680 seconds)


.. _sphx_glr_download_auto_examples_plot_sparse_group_lasso.py:
Expand All @@ -197,6 +197,10 @@ some values are 0 too

:download:`Download Python source code: plot_sparse_group_lasso.py <plot_sparse_group_lasso.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_sparse_group_lasso.zip <plot_sparse_group_lasso.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_sparse_recovery.rst.txt
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Expand Up @@ -190,7 +190,7 @@ Illustrate the superior performance of penalties for sparse recovery.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 8.881 seconds)
**Total running time of the script:** (0 minutes 8.549 seconds)


.. _sphx_glr_download_auto_examples_plot_sparse_recovery.py:
Expand All @@ -207,6 +207,10 @@ Illustrate the superior performance of penalties for sparse recovery.

:download:`Download Python source code: plot_sparse_recovery.py <plot_sparse_recovery.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_sparse_recovery.zip <plot_sparse_recovery.zip>`


.. only:: html

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10 changes: 7 additions & 3 deletions _sources/auto_examples/plot_survival_analysis.rst.txt
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Expand Up @@ -382,7 +382,7 @@ with more than x100 less time!

.. code-block:: none
speed up ratio: 930
speed up ratio: 730
Expand Down Expand Up @@ -566,7 +566,7 @@ Finally, let's compare the timings of both solvers

.. code-block:: none
speed up ratio: 1042
speed up ratio: 827
Expand All @@ -579,7 +579,7 @@ even for the Efron estimate.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 57.445 seconds)
**Total running time of the script:** (0 minutes 47.504 seconds)


.. _sphx_glr_download_auto_examples_plot_survival_analysis.py:
Expand All @@ -596,6 +596,10 @@ even for the Efron estimate.

:download:`Download Python source code: plot_survival_analysis.py <plot_survival_analysis.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_survival_analysis.zip <plot_survival_analysis.zip>`


.. only:: html

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8 changes: 6 additions & 2 deletions _sources/auto_examples/plot_ucurve.rst.txt
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Expand Up @@ -69,7 +69,7 @@ We also retrain 2000 samples in training dataset.

.. code-block:: none
file_sizes: 0%| | 0.00/13.7M [00:00<?, ?B/s] file_sizes: 0%| | 24.6k/13.7M [00:00<01:49, 125kB/s] file_sizes: 0%| | 49.2k/13.7M [00:00<01:50, 124kB/s] file_sizes: 1%|▏ | 106k/13.7M [00:00<01:08, 199kB/s] file_sizes: 2%|▍ | 221k/13.7M [00:00<00:38, 349kB/s] file_sizes: 3%|▉ | 451k/13.7M [00:00<00:20, 639kB/s] file_sizes: 7%|█▊ | 909k/13.7M [00:01<00:10, 1.21MB/s] file_sizes: 13%|███▍ | 1.83M/13.7M [00:01<00:05, 2.32MB/s] file_sizes: 27%|██████▉ | 3.66M/13.7M [00:01<00:02, 4.50MB/s] file_sizes: 38%|█████████▉ | 5.23M/13.7M [00:01<00:01, 5.56MB/s] file_sizes: 50%|████████████▉ | 6.81M/13.7M [00:01<00:01, 6.29MB/s] file_sizes: 61%|███████████████▊ | 8.38M/13.7M [00:02<00:00, 6.81MB/s] file_sizes: 80%|████████████████████▊ | 11.0M/13.7M [00:02<00:00, 8.65MB/s] file_sizes: 92%|███████████████████████▊ | 12.6M/13.7M [00:02<00:00, 8.48MB/s] file_sizes: 100%|██████████████████████████| 13.7M/13.7M [00:02<00:00, 5.29MB/s]
file_sizes: 0%| | 0.00/13.7M [00:00<?, ?B/s] file_sizes: 0%| | 24.6k/13.7M [00:00<01:48, 126kB/s] file_sizes: 0%| | 49.2k/13.7M [00:00<01:48, 126kB/s] file_sizes: 1%|▏ | 106k/13.7M [00:00<01:07, 203kB/s] file_sizes: 1%|▎ | 131k/13.7M [00:00<01:18, 173kB/s] file_sizes: 2%|▌ | 246k/13.7M [00:00<00:41, 323kB/s] file_sizes: 3%|▉ | 475k/13.7M [00:01<00:21, 614kB/s] file_sizes: 11%|██▊ | 1.46M/13.7M [00:01<00:05, 2.05MB/s] file_sizes: 16%|████▎ | 2.24M/13.7M [00:01<00:04, 2.69MB/s] file_sizes: 30%|███████▋ | 4.08M/13.7M [00:01<00:02, 4.77MB/s] file_sizes: 41%|██████████▋ | 5.65M/13.7M [00:01<00:01, 5.79MB/s] file_sizes: 53%|█████████████▋ | 7.23M/13.7M [00:02<00:01, 6.50MB/s] file_sizes: 64%|████████████████▋ | 8.80M/13.7M [00:02<00:00, 6.99MB/s] file_sizes: 76%|███████████████████▋ | 10.4M/13.7M [00:02<00:00, 7.34MB/s] file_sizes: 95%|████████████████████████▌ | 13.0M/13.7M [00:02<00:00, 9.08MB/s] file_sizes: 100%|██████████████████████████| 13.7M/13.7M [00:02<00:00, 5.01MB/s]
Expand Down Expand Up @@ -150,7 +150,7 @@ Notice the "sweet spot" at around ``1e-4``, which sits at the boundary between u

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 13.957 seconds)
**Total running time of the script:** (0 minutes 13.510 seconds)


.. _sphx_glr_download_auto_examples_plot_ucurve.py:
Expand All @@ -167,6 +167,10 @@ Notice the "sweet spot" at around ``1e-4``, which sits at the boundary between u

:download:`Download Python source code: plot_ucurve.py <plot_ucurve.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_ucurve.zip <plot_ucurve.zip>`


.. only:: html

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6 changes: 5 additions & 1 deletion _sources/auto_examples/plot_zero_weights_lasso.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -84,7 +84,7 @@ allowing it to not compute the dual and handle 0 weights.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.374 seconds)
**Total running time of the script:** (0 minutes 0.367 seconds)


.. _sphx_glr_download_auto_examples_plot_zero_weights_lasso.py:
Expand All @@ -101,6 +101,10 @@ allowing it to not compute the dual and handle 0 weights.

:download:`Download Python source code: plot_zero_weights_lasso.py <plot_zero_weights_lasso.py>`

.. container:: sphx-glr-download sphx-glr-download-zip

:download:`Download zipped: plot_zero_weights_lasso.zip <plot_zero_weights_lasso.zip>`


.. only:: html

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24 changes: 12 additions & 12 deletions _sources/auto_examples/sg_execution_times.rst.txt
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Expand Up @@ -6,7 +6,7 @@

Computation times
=================
**02:49.958** total execution time for 11 files **from auto_examples**:
**02:36.067** total execution time for 11 files **from auto_examples**:

.. container::

Expand All @@ -33,35 +33,35 @@ Computation times
- Time
- Mem (MB)
* - :ref:`sphx_glr_auto_examples_plot_survival_analysis.py` (``plot_survival_analysis.py``)
- 00:57.445
- 00:47.504
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_compare_time.py` (``plot_compare_time.py``)
- 00:47.620
- 00:46.603
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_group_logistic_regression.py` (``plot_group_logistic_regression.py``)
- 00:15.201
- 00:14.201
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_ucurve.py` (``plot_ucurve.py``)
- 00:13.957
- 00:13.510
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_logreg_various_penalties.py` (``plot_logreg_various_penalties.py``)
- 00:08.967
- 00:08.618
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_sparse_recovery.py` (``plot_sparse_recovery.py``)
- 00:08.881
- 00:08.549
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_sparse_group_lasso.py` (``plot_sparse_group_lasso.py``)
- 00:05.796
- 00:05.680
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_reweighted_l1.py` (``plot_reweighted_l1.py``)
- 00:05.326
- 00:05.002
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_lasso_vs_weighted.py` (``plot_lasso_vs_weighted.py``)
- 00:03.903
- 00:03.872
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_pen_prox.py` (``plot_pen_prox.py``)
- 00:02.487
- 00:02.161
- 0.0
* - :ref:`sphx_glr_auto_examples_plot_zero_weights_lasso.py` (``plot_zero_weights_lasso.py``)
- 00:00.374
- 00:00.367
- 0.0
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