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name: build image (base) | ||
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on: | ||
workflow_dispatch: | ||
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concurrency: | ||
group: ${{ github.workflow }}-${{ github.ref }} | ||
cancel-in-progress: true | ||
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jobs: | ||
build: | ||
runs-on: ubuntu-latest | ||
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defaults: | ||
run: | ||
shell: bash -e {0} # -e to fail on error | ||
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permissions: | ||
contents: read | ||
packages: write | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
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- uses: docker/setup-buildx-action@v3 | ||
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- uses: docker/login-action@v3 | ||
with: | ||
registry: ghcr.io | ||
username: ${{ github.actor }} | ||
password: ${{ secrets.GITHUB_TOKEN }} | ||
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- uses: docker/build-push-action@v5 | ||
with: | ||
context: . | ||
file: ./Dockerfile | ||
push: true | ||
cache-from: type=registry,ref=ghcr.io/scverse/scvi-tools:buildcache | ||
cache-to: type=inline,ref=ghcr.io/scverse/scvi-tools:buildcache | ||
target: base | ||
tags: ghcr.io/scverse/scvi-tools:py3.11-cu12-base |
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name: build image (latest) | ||
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on: | ||
push: | ||
branches: [main, "[0-9]+.[0-9]+.x"] | ||
workflow_dispatch: | ||
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concurrency: | ||
group: ${{ github.workflow }}-${{ github.ref }} | ||
cancel-in-progress: true | ||
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jobs: | ||
build: | ||
runs-on: ubuntu-latest | ||
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defaults: | ||
run: | ||
shell: bash -e {0} # -e to fail on error | ||
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permissions: | ||
contents: read | ||
packages: write | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
dependencies: ["", "dev", "tutorials"] | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
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- uses: docker/setup-buildx-action@v3 | ||
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- uses: docker/login-action@v3 | ||
with: | ||
registry: ghcr.io | ||
username: ${{ github.actor }} | ||
password: ${{ secrets.GITHUB_TOKEN }} | ||
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- name: Set build inputs | ||
id: build | ||
run: | | ||
INPUT_DEPENDENCIES=${{ matrix.dependencies }} | ||
DEPENDENCIES=${INPUT_DEPENDENCIES:-"runtime"} | ||
echo "dependencies=${DEPENDENCIES}" >> $GITHUB_OUTPUT | ||
INPUT_REF=${{ github.ref_name }} | ||
if [[ $INPUT_REF == "main" ]]; then | ||
VERSION="latest" | ||
else | ||
VERSION=${INPUT_REF} | ||
fi | ||
echo "version=${VERSION}" >> $GITHUB_OUTPUT | ||
- uses: docker/build-push-action@v5 | ||
with: | ||
context: . | ||
file: ./Dockerfile | ||
push: true | ||
cache-from: type=registry,ref=ghcr.io/scverse/scvi-tools:buildcache | ||
cache-to: type=inline,ref=ghcr.io/scverse/scvi-tools:buildcache | ||
target: build | ||
tags: ghcr.io/scverse/scvi-tools:py3.11-cu12-${{ steps.build.outputs.version }}-${{ steps.build.outputs.dependencies }} | ||
build-args: | | ||
DEPENDENCIES=${{ matrix.dependencies }} |
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name: update tutorials | ||
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on: | ||
workflow_dispatch: | ||
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jobs: | ||
update: | ||
runs-on: ubuntu-latest | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
submodules: "recursive" | ||
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- name: Update tutorials 🔧 | ||
run: git submodule update --remote --recursive | ||
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- uses: peter-evans/create-pull-request@v6 | ||
with: | ||
commit-message: "docs: automated update of tutorials" | ||
title: "docs: automated update of tutorials" | ||
branch: "update-tutorials" | ||
base: "main" | ||
body: "automated update of tutorials submodule" |