Ab/signal recovery #60
Workflow file for this run
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| name: CI-Tests | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| test: | |
| env: | |
| FSLOUTPUTTYPE: NIFTI_GZ | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: | |
| # - 'macos-11' | |
| # - 'macos-12' | |
| - 'ubuntu-22.04' | |
| - 'ubuntu-20.04' | |
| python-version: | |
| - '3.10' | |
| steps: | |
| - name: Get home directory | |
| run: | | |
| echo ~ | |
| echo $HOME | |
| - uses: actions/checkout@v3 | |
| # - name: Set XCode version | |
| # if: contains(matrix.os, 'macos-11.0') | |
| # run: sudo xcode-select -s "/Applications/Xcode_12.2.app" | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Package installation | |
| run: | | |
| echo "fsleyes-plugin-shimming-toolbox installation" | |
| make install | |
| - name: Set path for Shimming Toolbox | |
| run: | | |
| echo "$HOME/shimming-toolbox/bin" >> $GITHUB_PATH | |
| - name: prelude Ubuntu | |
| if: contains(matrix.os, 'ubuntu') | |
| run: | | |
| echo "Download prelude" | |
| st_download_data prelude | |
| sudo install prelude/prelude /usr/local/bin | |
| # - name: Run unit tests Mac | |
| # if: contains(matrix.os, 'macos') | |
| # run: | | |
| # source ~/shimming-toolbox/python/bin/activate # to be able to call conda | |
| # py.test . -v | |
| - name: Run unit tests Ubuntu | |
| if: contains(matrix.os, 'ubuntu') | |
| run: | | |
| source ~/shimming-toolbox/python/bin/activate # to be able to call conda | |
| xvfb-run -a -s "-screen 0 1920x1200x24" py.test . -v |