Fix missing quote

Fixed bug introduced in 7e37d27
shimming-toolbox · Jan 16, 2024 · 5db1f0e · 5db1f0e
1 parent 3db949a
commit 5db1f0e
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/data_processing.ipynb b/data_processing.ipynb
@@ -313,9 +313,9 @@
     "for subject in subjects:\n",
     "    os.chdir(os.path.join(path_data, subject, \"fmap\"))\n",
     "    for shim_mode in shim_modes:\n",
-    "        # Use linear interpolation to preserve partial volume information (needed when extracting values along the cord)
+    "        # Use linear interpolation to preserve partial volume information (needed when extracting values along the cord)\n",
     "        !sct_apply_transfo -i ../anat/{subject}_acq-CoV_T2starw_crop_seg.nii.gz -d {subject}_acq-anat{shim_mode}_TB1TFL.nii.gz -w warp_{subject}_acq-CoV_T2starw_crop2{subject}_acq-anat{shim_mode}_TB1TFL.nii.gz -x linear -o {subject}_acq-anat{shim_mode}_TB1TFL_seg.nii.gz\n",
-    "        # Use nearest neighbour (nn) interpolation because we are dealing with non-binary discrete labels
+    "        # Use nearest neighbour (nn) interpolation because we are dealing with non-binary discrete labels\n",
     "        !sct_apply_transfo -i ../anat/{subject}_acq-CoV_T2starw_crop_seg_labeled.nii.gz -d {subject}_acq-anat{shim_mode}_TB1TFL.nii.gz -w warp_{subject}_acq-CoV_T2starw_crop2{subject}_acq-anat{shim_mode}_TB1TFL.nii.gz -x nn -o {subject}_acq-anat{shim_mode}_TB1TFL_seg_labeled.nii.gz"
    ]
   },