Download dataset from OpenNeuro

shimming-toolbox · Dec 22, 2023 · 6692d53 · 6692d53
1 parent 0ae1353
commit 6692d53
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Showing 2 changed files with 17 additions and 1 deletion.
diff --git a/Analysis.ipynb b/Analysis.ipynb
@@ -66,6 +66,20 @@
     "import pandas as pd"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "3393a694",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Download data\n",
+    "\n",
+    "!datalad install https://github.com/OpenNeuroDatasets/ds004906.git\n",
+    "os.chdir(\"ds004906\")\n",
+    "!datalad get sub-01/"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,
@@ -718,7 +732,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.10.8"
+   "version": "3.9.18"
   }
  },
  "nbformat": 4,

diff --git a/requirements.txt b/requirements.txt
@@ -1 +1,3 @@
+datalad
+notebook
 tabulate