Sample and display CSF/SC T2starw and B1+ between C3-T2

Fixes #38, Fixes #75
shimming-toolbox · Jan 24, 2024 · febb3c6 · febb3c6
1 parent a9b1350
commit febb3c6
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/data_processing.ipynb b/data_processing.ipynb
@@ -337,8 +337,8 @@
     "# Fixed grid for x-axis\n",
     "x_grid = np.linspace(0, 1, 100)\n",
     "\n",
-    "# z-slices corresponding to levels C1 to T2 on the PAM50 template. These will be used to scale the x-label of each subject.\n",
-    "original_vector = np.array([984, 938, 907, 870, 833, 800, 769, 735, 692, 646])\n",
+    "# z-slices corresponding to levels C3 to T2 on the PAM50 template. These will be used to scale the x-label of each subject.\n",
+    "original_vector = np.array([907, 870, 833, 800, 769, 735, 692, 646])\n",
     "\n",
     "# Normalize the PAM50 z-slice numbers to the 1-0 range (to show inferior-superior instead of superior-inferior)\n",
     "min_val = original_vector.min()\n",
@@ -546,8 +546,8 @@
     "# Fixed grid for x-axis\n",
     "x_grid = np.linspace(0, 1, 100)\n",
     "\n",
-    "# z-slices corresponding to levels C1 to T2 on the PAM50 template. These will be used to scale the x-label of each subject.\n",
-    "original_vector = np.array([984, 938, 907, 870, 833, 800, 769, 735, 692, 646])\n",
+    "# z-slices corresponding to levels C3 to T2 on the PAM50 template. These will be used to scale the x-label of each subject.\n",
+    "original_vector = np.array([907, 870, 833, 800, 769, 735, 692, 646])\n",
     "\n",
     "# Normalize the PAM50 z-slice numbers to the 1-0 range (to show inferior-superior instead of superior-inferior)\n",
     "min_val = original_vector.min()\n",