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remove spaces from scale datatype in BrAPI (enables type specific tra…
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…it input on Fieldbook); include entry number in trial download; add entry numbers to label designer; improve population related function on accession detail page; limit stock property autocomplete to 100 in stock search to prevent page crashes in large databases; flexible headers and entry numbers in single and multi trial upload; tweak GPCP tool for non-dioecious plants; run test on ubuntu-latest.
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@lukasmueller
lukasmueller committed Jun 4, 2024
1 parent 29a2063 commit 314b9a4
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion cxgn/sgn
Submodule sgn updated 52 files
+1 −1 .github/workflows/static.yml
+1 −1 .github/workflows/test.yml
+3 −3 .github/workflows/test_static.yml
+4 −3 cgi-bin/tools/tree_browser/index.pl
+1 −1 js/install_node.sh
+1 −1 js/package.json
+15 −3 js/source/legacy/CXGN/BreedersToolbox/Accessions.js
+19 −1 js/source/legacy/CXGN/BreedersToolbox/UploadPhenotype.js
+63 −63 js/source/legacy/CXGN/BreedersToolbox/UploadTrial.js
+1 −0 lib/CXGN/BrAPI/v2/Scales.pm
+5 −2 lib/CXGN/Fieldbook/DownloadTrial.pm
+38 −5 lib/CXGN/Pedigree/AddPopulations.pm
+42 −9 lib/CXGN/Phenotypes/StorePhenotypes.pm
+181 −0 lib/CXGN/Population.pm
+1 −1 lib/CXGN/Trial.pm
+328 −448 lib/CXGN/Trial/ParseUpload/Plugin/MultipleTrialDesignExcelFormat.pm
+288 −292 lib/CXGN/Trial/ParseUpload/Plugin/TrialExcelFormat.pm
+1 −1 lib/CXGN/Trial/TrialDesignStore/PhenotypingTrial.pm
+119 −31 lib/SGN/Controller/AJAX/BreedersToolbox/Population.pm
+28 −4 lib/SGN/Controller/AJAX/Cross.pm
+1 −0 lib/SGN/Controller/AJAX/DroneImagery/DroneImageryUpload.pm
+2 −0 lib/SGN/Controller/AJAX/LabelDesigner.pm
+7 −3 lib/SGN/Controller/AJAX/PhenotypesDownload.pm
+15 −3 lib/SGN/Controller/AJAX/PhenotypesUpload.pm
+1 −1 lib/SGN/Controller/AJAX/Search/Annotation.pm
+1 −1 lib/SGN/Controller/AJAX/Stock.pm
+60 −1 lib/SGN/Controller/AJAX/Trial.pm
+22 −2 lib/SGN/Controller/AJAX/TrialMetadata.pm
+6 −1 lib/SGN/Controller/BreedersToolbox/Download.pm
+1 −1 lib/SGN/Controller/BreedersToolbox/GraphicalFiltering.pm
+8 −8 lib/SGN/Controller/BreedersToolbox/Trial.pm
+1 −2 lib/SGN/Controller/BreedersToolbox/TrialComparison.pm
+1 −1 lib/SGN/Controller/FieldBook.pm
+13 −3 lib/SGN/Controller/Search/Annotation.pm
+7 −0 lib/SGN/Controller/Stock.pm
+21 −0 mason/breeders_toolbox/manage_populations_dialogs.mas
+16 −4 mason/breeders_toolbox/trial/trial_upload_dialogs.mas
+6 −2 mason/page/detail_page_2_col_section.mas
+65 −0 mason/search/annotation/genes.mas
+0 −115 mason/search/annotation/stub.mas
+11 −6 mason/stock/index.mas
+12 −0 mason/stock/population_delete.mas
+46 −0 mason/stock/population_members.mas
+9 −35 t/selenium2/breeders/upload_phenotype/fieldbook_phenotype_upload.t
+5 −18 t/selenium2/breeders/upload_phenotype/upload_datacollector_spreadsheet.t
+13 −36 t/selenium2/breeders/upload_phenotype/upload_phenotyping_spreadsheet.t
+2 −3 t/unit_fixture/CXGN/Trial/ParseUpload.t
+1 −1 t/unit_fixture/CXGN/Uploading/Storebrapiobservations.t
+7 −4 t/unit_fixture/CXGN/Uploading/TrialUpload.t
+1 −1 t/unit_fixture/CXGN/Uploading/ValidateNIRS.t
+34 −3 t/unit_mech/AJAX/BreedersToolbox/Population.t
+3 −3 t/unit_mech/AJAX/_BrAPIv2_phenotyping.t

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