Merge pull request #3620 from solgenomics/topic/pheno_jsonb_refresh

Refresh both phenoview and the jsonb matview after adding trait data
solgenomics · Jul 15, 2021 · 9e7315c · 9e7315c
2 parents c56b6ad + d675c77
commit 9e7315c
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/bin/refresh_matviews.pl b/bin/refresh_matviews.pl
@@ -78,7 +78,7 @@ =head1 AUTHOR
        @mv_names = ('materialized_stockprop');
     }
     if ($mode eq 'phenotypes') {
-       @mv_names = ("materialized_phenotype_jsonb_table");
+       @mv_names = ("materialized_phenoview", "materialized_phenotype_jsonb_table");
     }
 
     my $status = refresh_mvs($dbh, \@mv_names, $concurrent);

diff --git a/lib/CXGN/BrAPI/v1/Observations.pm b/lib/CXGN/BrAPI/v1/Observations.pm
@@ -150,7 +150,7 @@ sub observations_store {
 
     ## Will need to initiate refresh matviews in controller instead
     my $bs = CXGN::BreederSearch->new( { dbh=>$c->dbc->dbh, dbname=>$c->config->{dbname}, } );
-    my $refresh = $bs->refresh_matviews($c->config->{dbhost}, $c->config->{dbname}, $c->config->{dbuser}, $c->config->{dbpass}, 'fullview', 'concurrent', $c->config->{basepath});
+    my $refresh = $bs->refresh_matviews($c->config->{dbhost}, $c->config->{dbname}, $c->config->{dbuser}, $c->config->{dbpass}, 'phenotypes', 'concurrent', $c->config->{basepath});
 
     return CXGN::BrAPI::JSONResponse->return_success(\%result, $pagination, \@data_files, $status, $stored_observation_success);
 

diff --git a/lib/SGN/Controller/AJAX/PhenotypesUpload.pm b/lib/SGN/Controller/AJAX/PhenotypesUpload.pm
@@ -168,7 +168,7 @@ sub upload_phenotype_store_POST : Args(1) {
 
     push @$success_status, "Metadata saved for archived file.";
     my $bs = CXGN::BreederSearch->new( { dbh=>$c->dbc->dbh, dbname=>$c->config->{dbname}, } );
-    my $refresh = $bs->refresh_matviews($c->config->{dbhost}, $c->config->{dbname}, $c->config->{dbuser}, $c->config->{dbpass}, 'fullview', 'concurrent', $c->config->{basepath});
+    my $refresh = $bs->refresh_matviews($c->config->{dbhost}, $c->config->{dbname}, $c->config->{dbuser}, $c->config->{dbpass}, 'phenotypes', 'concurrent', $c->config->{basepath});
 
     $c->stash->{rest} = {success => $success_status, error => $error_status};
 }