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batch_single_subject.sh: Fix remaining instance of t2.nii.gz
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joshuacwnewton committed Oct 30, 2023
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2 changes: 1 addition & 1 deletion single_subject/batch_single_subject.sh
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Expand Up @@ -227,7 +227,7 @@ sct_deepseg -i t2_lumbar.nii.gz -task seg_lumbar_sc_t2w
#
# However, since this is an automated script with example data, we will place the labels at known locations for the
# sake of reproducing the results in the tutorial.
sct_label_utils -i t2.nii.gz -create 22,77,187,17:27,79,80,60 -o t2_lumbar_labels.nii.gz
sct_label_utils -i t2_lumbar.nii.gz -create 22,77,187,17:27,79,80,60 -o t2_lumbar_labels.nii.gz

# Register the image to the template using segmentation and labels
sct_register_to_template -i t2_lumbar.nii.gz \
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